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    TFAM transcription factor A, mitochondrial [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 701368, updated on 17-Aug-2024

    Summary

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    Official Symbol
    TFAMprovided by VGNC
    Official Full Name
    transcription factor A, mitochondrialprovided by VGNC
    Primary source
    VGNC:VGNC:78319
    Locus tag
    EGK_19843
    See related
    Ensembl:ENSMMUG00000019829
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See TFAM in Genome Data Viewer
    Location:
    chromosome: 9
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 9 NC_041762.1 (79634947..79646455, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 9 NC_027901.1 (74395271..74406569, complement)

    Chromosome 9 - NC_041762.1Genomic Context describing neighboring genes Neighboring gene calcium uptake protein 1, mitochondrial pseudogene Neighboring gene BicC family RNA binding protein 1 Neighboring gene ubiquitin conjugating enzyme E2 D1 Neighboring gene CDGSH iron sulfur domain 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequencing and comparison of two nonhuman primate animal models, the cynomolgus and Chinese rhesus macaques. Yan G, et al. Nat Biotechnol, 2011 Oct 16. PMID 22002653
    2. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables transcription cis-regulatory region binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    transcription factor A, mitochondrial

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041762.1 Reference Mmul_10 Primary Assembly

      Range
      79634947..79646455 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015147590.2 → XP_015003076.1  transcription factor A, mitochondrial isoform X1

      Conserved Domains (2) summary
      COG5648
      Location:94 → 235
      NHP6B; Chromatin-associated proteins containing the HMG domain [Chromatin structure and dynamics]
      cd01390
      Location:174 → 235
      HMGB-UBF_HMG-box; class II and III members of the HMG-box superfamily of DNA-binding proteins. These proteins bind the minor groove of DNA in a non-sequence specific fashion and contain two or more tandem HMG boxes. Class II members include non-histone chromosomal ...

    2. XM_001097656.4 → XP_001097656.1  transcription factor A, mitochondrial isoform X2

      See identical proteins and their annotated locations for XP_001097656.1

      UniProtKB/TrEMBL
      A0A1D5Q9M0, A0A8J8YJS0, F7FXP0, G7N2F5
      Related
      ENSMMUP00000026067.2, ENSMMUT00000027862.4
      Conserved Domains (2) summary
      cd01390
      Location:155 → 216
      HMGB-UBF_HMG-box; class II and III members of the HMG-box superfamily of DNA-binding proteins. These proteins bind the minor groove of DNA in a non-sequence specific fashion and contain two or more tandem HMG boxes. Class II members include non-histone chromosomal ...
      pfam00505
      Location:50 → 117
      HMG_box; HMG (high mobility group) box
    Nucleotide Protein
    Heading Accession and Version

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