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    MLPH melanophilin [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 694820, updated on 17-Aug-2024

    Summary

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    Official Symbol
    MLPHprovided by VGNC
    Official Full Name
    melanophilinprovided by VGNC
    Primary source
    VGNC:VGNC:99383
    See related
    Ensembl:ENSMMUG00000012089
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See MLPH in Genome Data Viewer
    Location:
    chromosome: 12
    Exon count:
    17
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 12 NC_041765.1 (124881411..124948748)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 12 NC_027904.1 (120209348..120274776)

    Chromosome 12 - NC_041765.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC114671453 Neighboring gene COP9 signalosome subunit 8 Neighboring gene collagen type VI alpha 3 chain Neighboring gene uncharacterized LOC106992782 Neighboring gene U6 spliceosomal RNA Neighboring gene prolactin releasing hormone

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables actin binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables myosin binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables small GTPase binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in intracellular protein transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cortical actin cytoskeleton IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    melanophilin

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041765.1 Reference Mmul_10 Primary Assembly

      Range
      124881411..124948748
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015111414.2 → XP_014966900.2  melanophilin isoform X1

      UniProtKB/TrEMBL
      A0A1D5QPD2, G7N994
      Related
      ENSMMUP00000049909.2, ENSMMUT00000066538.2
      Conserved Domains (2) summary
      pfam02318
      Location:8 → 125
      FYVE_2; FYVE-type zinc finger
      pfam04698
      Location:452 → 510
      Rab_eff_C; Rab effector MyRIP/melanophilin C-terminus

    2. XM_015111416.2 → XP_014966902.2  melanophilin isoform X2

      UniProtKB/TrEMBL
      A0A1D5RKG5, G7N994
      Related
      ENSMMUP00000060809.2, ENSMMUT00000057990.2
      Conserved Domains (2) summary
      pfam02318
      Location:8 → 125
      FYVE_2; FYVE-type zinc finger
      pfam04698
      Location:424 → 482
      Rab_eff_C; Rab effector MyRIP/melanophilin C-terminus

    RNA

    1. XR_001438833.2 RNA Sequence

    2. XR_003721478.1 RNA Sequence

    3. XR_003721480.1 RNA Sequence

    4. XR_003721481.1 RNA Sequence

    5. XR_003721479.1 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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