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    KCNIP3 potassium voltage-gated channel interacting protein 3 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 704307, updated on 17-Aug-2024

    Summary

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    Official Symbol
    KCNIP3provided by VGNC
    Official Full Name
    potassium voltage-gated channel interacting protein 3provided by VGNC
    Primary source
    VGNC:VGNC:73834
    See related
    Ensembl:ENSMMUG00000059372
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See KCNIP3 in Genome Data Viewer
    Location:
    chromosome: 13
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 13 NC_041766.1 (303325..395630)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 13 NC_027905.1 (91682914..91775521)

    Chromosome 13 - NC_041766.1Genomic Context describing neighboring genes Neighboring gene zinc finger protein 514 Neighboring gene zinc finger protein 383-like Neighboring gene prominin 2 Neighboring gene fumarylacetoacetate hydrolase domain containing 2A Neighboring gene fumarylacetoacetate hydrolase domain-containing protein 2A

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription repressor activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables calcium ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables potassium channel regulator activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in negative regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of potassium ion transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of voltage-gated potassium channel complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    calsenilin

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001257864.1 → NP_001244793.1  calsenilin

      See identical proteins and their annotated locations for NP_001244793.1

      Status: PROVISIONAL

      Source sequence(s)
      JU332335
      UniProtKB/TrEMBL
      F7A910, F7HHE2, H9EV38
      Related
      ENSMMUP00000020730.3, ENSMMUT00000022157.4
      Conserved Domains (1) summary
      COG5126
      Location:81 → 245
      FRQ1; Ca2+-binding protein, EF-hand superfamily [Signal transduction mechanisms]

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041766.1 Reference Mmul_10 Primary Assembly

      Range
      303325..395630
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015112830.2 → XP_014968316.1  calsenilin isoform X1

      UniProtKB/TrEMBL
      A0A5F8A8T0, F7HHE2
      Related
      ENSMMUP00000073327.1, ENSMMUT00000092765.1
      Conserved Domains (1) summary
      COG5126
      Location:104 → 268
      FRQ1; Ca2+-binding protein, EF-hand superfamily [Signal transduction mechanisms]

    2. XM_015112831.2 → XP_014968317.1  calsenilin isoform X2

      UniProtKB/TrEMBL
      H9F5R4, H9Z8A2
      Related
      ENSMMUP00000080411.1, ENSMMUT00000091415.1
      Conserved Domains (1) summary
      COG5126
      Location:55 → 219
      FRQ1; Ca2+-binding protein, EF-hand superfamily [Signal transduction mechanisms]
    Nucleotide Protein
    Heading Accession and Version

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