U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    TIRAP TIR domain containing adaptor protein [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 714377, updated on 17-Aug-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    TIRAPprovided by VGNC
    Official Full Name
    TIR domain containing adaptor proteinprovided by VGNC
    Primary source
    VGNC:VGNC:107652
    See related
    Ensembl:ENSMMUG00000051458
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See TIRAP in Genome Data Viewer
    Location:
    chromosome: 14
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 14 NC_041767.1 (119054358..119069541)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 14 NC_027906.1 (119111606..119123406)

    Chromosome 14 - NC_041767.1Genomic Context describing neighboring genes Neighboring gene SRP receptor subunit alpha Neighboring gene FAD dependent oxidoreductase domain containing 1 Neighboring gene small nucleolar RNA U13 Neighboring gene uncharacterized LOC114672435 Neighboring gene decapping enzyme, scavenger Neighboring gene ST3 beta-galactoside alpha-2,3-sialyltransferase 4

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Natural selection in the TLR-related genes in the course of primate evolution. Nakajima T, et al. Immunogenetics, 2008 Dec. PMID 18810425
    2. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in signal transduction IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    toll/interleukin-1 receptor domain-containing adapter protein

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001130435.1 → NP_001123907.1  toll/interleukin-1 receptor domain-containing adapter protein

      See identical proteins and their annotated locations for NP_001123907.1

      Status: PROVISIONAL

      Source sequence(s)
      AB446483
      UniProtKB/TrEMBL
      B3Y690, G7NCY6
      Conserved Domains (1) summary
      pfam13676
      Location:87 → 207
      TIR_2; TIR domain

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041767.1 Reference Mmul_10 Primary Assembly

      Range
      119054358..119069541
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028832729.1 → XP_028688562.1  toll/interleukin-1 receptor domain-containing adapter protein isoform X3

    2. XM_028832727.1 → XP_028688560.1  toll/interleukin-1 receptor domain-containing adapter protein isoform X1

      UniProtKB/TrEMBL
      G7NCY6, H9Z500
      Conserved Domains (1) summary
      pfam13676
      Location:87 → 207
      TIR_2; TIR domain

    3. XM_028832728.1 → XP_028688561.1  toll/interleukin-1 receptor domain-containing adapter protein isoform X1

      UniProtKB/TrEMBL
      G7NCY6, H9Z500
      Conserved Domains (1) summary
      pfam13676
      Location:87 → 207
      TIR_2; TIR domain

    4. XM_028832731.1 → XP_028688564.1  toll/interleukin-1 receptor domain-containing adapter protein isoform X4

    5. XM_028832730.1 → XP_028688563.1  toll/interleukin-1 receptor domain-containing adapter protein isoform X3

    6. XM_015115922.2 → XP_014971408.1  toll/interleukin-1 receptor domain-containing adapter protein isoform X2

      UniProtKB/TrEMBL
      B3Y690, G7NCY6
      Related
      ENSMMUP00000071191.1, ENSMMUT00000083304.1
      Conserved Domains (1) summary
      pfam13676
      Location:87 → 207
      TIR_2; TIR domain

    7. XM_015115919.2 → XP_014971405.1  toll/interleukin-1 receptor domain-containing adapter protein isoform X1

      UniProtKB/TrEMBL
      G7NCY6, H9Z500
      Conserved Domains (1) summary
      pfam13676
      Location:87 → 207
      TIR_2; TIR domain

    8. XM_015115920.2 → XP_014971406.1  toll/interleukin-1 receptor domain-containing adapter protein isoform X1

      UniProtKB/TrEMBL
      G7NCY6, H9Z500
      Conserved Domains (1) summary
      pfam13676
      Location:87 → 207
      TIR_2; TIR domain
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.