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    ZNF18 zinc finger protein 18 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 718115, updated on 17-Aug-2024

    Summary

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    Official Symbol
    ZNF18provided by VGNC
    Official Full Name
    zinc finger protein 18provided by VGNC
    Primary source
    VGNC:VGNC:78857
    Locus tag
    EGK_08212
    See related
    Ensembl:ENSMMUG00000018541
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See ZNF18 in Genome Data Viewer
    Location:
    chromosome: 16
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 16 NC_041769.1 (11762763..11783294, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 16 NC_027908.1 (12062161..12082806, complement)

    Chromosome 16 - NC_041769.1Genomic Context describing neighboring genes Neighboring gene collagen alpha-1(I) chain-like Neighboring gene shisa family member 6 Neighboring gene dynein axonemal heavy chain 9 Neighboring gene B-cell CLL/lymphoma 7 protein family member C pseudogene Neighboring gene microRNA mir-762-2 Neighboring gene U11 spliceosomal RNA Neighboring gene small nucleolar RNA U3 Neighboring gene mitogen-activated protein kinase kinase 4

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    zinc finger protein 18
    Names
    Zinc finger protein KOX11

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041769.1 Reference Mmul_10 Primary Assembly

      Range
      11762763..11783294 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015118610.2 → XP_014974096.1  zinc finger protein 18 isoform X2

      UniProtKB/TrEMBL
      F7A1I9
      Related
      ENSMMUP00000035191.3, ENSMMUT00000042192.3
      Conserved Domains (6) summary
      COG5048
      Location:420 → 513
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:465 → 485
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam00096
      Location:519 → 541
      zf-C2H2; Zinc finger, C2H2 type
      pfam13465
      Location:505 → 529
      zf-H2C2_2; Zinc-finger double domain
      cl02581
      Location:222 → 269
      KRAB_A-box; KRAB (Kruppel-associated box) domain -A box
      cl02605
      Location:37 → 148
      SCAN; SCAN oligomerization domain

    2. XM_015118606.2 → XP_014974092.1  zinc finger protein 18 isoform X1

      UniProtKB/TrEMBL
      A0A663DG28, A0A8J8Y8T8, F6VVX7, F7A1I9, G7NIT3
      Related
      ENSMMUP00000024397.4, ENSMMUT00000026070.4
      Conserved Domains (6) summary
      COG5048
      Location:421 → 514
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:466 → 486
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam00096
      Location:520 → 542
      zf-C2H2; Zinc finger, C2H2 type
      pfam13465
      Location:506 → 530
      zf-H2C2_2; Zinc-finger double domain
      cl02581
      Location:222 → 270
      KRAB_A-box; KRAB (Kruppel-associated box) domain -A box
      cl02605
      Location:37 → 148
      SCAN; SCAN oligomerization domain

    3. XM_015118608.2 → XP_014974094.1  zinc finger protein 18 isoform X1

      UniProtKB/TrEMBL
      A0A663DG28, A0A8J8Y8T8, F6VVX7, F7A1I9, G7NIT3
      Conserved Domains (6) summary
      COG5048
      Location:421 → 514
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:466 → 486
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam00096
      Location:520 → 542
      zf-C2H2; Zinc finger, C2H2 type
      pfam13465
      Location:506 → 530
      zf-H2C2_2; Zinc-finger double domain
      cl02581
      Location:222 → 270
      KRAB_A-box; KRAB (Kruppel-associated box) domain -A box
      cl02605
      Location:37 → 148
      SCAN; SCAN oligomerization domain

    4. XM_015118607.2 → XP_014974093.1  zinc finger protein 18 isoform X1

      UniProtKB/TrEMBL
      A0A663DG28, A0A8J8Y8T8, F6VVX7, F7A1I9, G7NIT3
      Conserved Domains (6) summary
      COG5048
      Location:421 → 514
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:466 → 486
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam00096
      Location:520 → 542
      zf-C2H2; Zinc finger, C2H2 type
      pfam13465
      Location:506 → 530
      zf-H2C2_2; Zinc-finger double domain
      cl02581
      Location:222 → 270
      KRAB_A-box; KRAB (Kruppel-associated box) domain -A box
      cl02605
      Location:37 → 148
      SCAN; SCAN oligomerization domain

    5. XM_015118609.2 → XP_014974095.1  zinc finger protein 18 isoform X2

      UniProtKB/TrEMBL
      F7A1I9
      Conserved Domains (6) summary
      COG5048
      Location:420 → 513
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:465 → 485
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam00096
      Location:519 → 541
      zf-C2H2; Zinc finger, C2H2 type
      pfam13465
      Location:505 → 529
      zf-H2C2_2; Zinc-finger double domain
      cl02581
      Location:222 → 269
      KRAB_A-box; KRAB (Kruppel-associated box) domain -A box
      cl02605
      Location:37 → 148
      SCAN; SCAN oligomerization domain

    6. XM_015118605.2 → XP_014974091.1  zinc finger protein 18 isoform X1

      UniProtKB/TrEMBL
      A0A663DG28, A0A8J8Y8T8, F6VVX7, F7A1I9, G7NIT3
      Conserved Domains (6) summary
      COG5048
      Location:421 → 514
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:466 → 486
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam00096
      Location:520 → 542
      zf-C2H2; Zinc finger, C2H2 type
      pfam13465
      Location:506 → 530
      zf-H2C2_2; Zinc-finger double domain
      cl02581
      Location:222 → 270
      KRAB_A-box; KRAB (Kruppel-associated box) domain -A box
      cl02605
      Location:37 → 148
      SCAN; SCAN oligomerization domain
    Nucleotide Protein
    Heading Accession and Version

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