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    CEP20 centrosomal protein 20 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 717817, updated on 17-Aug-2024

    Summary

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    Official Symbol
    CEP20provided by VGNC
    Official Full Name
    centrosomal protein 20provided by VGNC
    Primary source
    VGNC:VGNC:99500
    Locus tag
    EGK_12536
    See related
    Ensembl:ENSMMUG00000038422
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Also known as
    FOPNL
    Orthologs
    human mouse all
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    Genomic context

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    See CEP20 in Genome Data Viewer
    Location:
    chromosome: 20
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 20 NC_041773.1 (15445833..15467994, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 20 NC_027912.1 (15669028..15691185, complement)

    Chromosome 20 - NC_041773.1Genomic Context describing neighboring genes Neighboring gene microRNA mir-484 Neighboring gene nudE neurodevelopment protein 1 Neighboring gene myosin heavy chain 11 Neighboring gene cathepsin D Neighboring gene U6 spliceosomal RNA Neighboring gene 60S ribosomal protein L15 pseudogene Neighboring gene ATP binding cassette subfamily C member 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cilium assembly IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in microtubule anchoring IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in centrosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in ciliary basal body IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in motile cilium IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    lisH domain-containing protein FOPNL
    Names
    FGFR1OP N-terminal like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041773.1 Reference Mmul_10 Primary Assembly

      Range
      15445833..15467994 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015125698.2 → XP_014981184.1  lisH domain-containing protein FOPNL isoform X4

      UniProtKB/TrEMBL
      A0A1D5Q8M3
      Related
      ENSMMUP00000044391.2, ENSMMUT00000054050.2
      Conserved Domains (1) summary
      pfam09398
      Location:43 → 98
      FOP_dimer; FOP N terminal dimerisation domain

    2. XM_001109724.4 → XP_001109724.3  lisH domain-containing protein FOPNL isoform X1

      UniProtKB/TrEMBL
      A0A1D5QWH5, A0A663DAH9, A0A8J8XGQ0, G7NPQ7, H9F4N9
      Related
      ENSMMUP00000052405.2, ENSMMUT00000077427.2
      Conserved Domains (1) summary
      pfam09398
      Location:43 → 113
      FOP_dimer; FOP N terminal dimerization domain

    3. XM_028840932.1 → XP_028696765.1  lisH domain-containing protein FOPNL isoform X3

      Conserved Domains (1) summary
      cl29685
      Location:3 → 47
      LisH_2

    4. XM_015125697.2 → XP_014981183.1  lisH domain-containing protein FOPNL isoform X2

      UniProtKB/TrEMBL
      H9F4N9
      Conserved Domains (1) summary
      pfam09398
      Location:43 → 113
      FOP_dimer; FOP N terminal dimerization domain
    Nucleotide Protein
    Heading Accession and Version

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