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    POMT2 protein O-mannosyltransferase 2 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 705604, updated on 17-Aug-2024

    Summary

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    Official Symbol
    POMT2provided by VGNC
    Official Full Name
    protein O-mannosyltransferase 2provided by VGNC
    Primary source
    VGNC:VGNC:76077
    See related
    Ensembl:ENSMMUG00000001095
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See POMT2 in Genome Data Viewer
    Location:
    chromosome: 7
    Exon count:
    22
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 7 NC_041760.1 (139381447..139429525, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 7 NC_027899.1 (139701686..139749460, complement)

    Chromosome 7 - NC_041760.1Genomic Context describing neighboring genes Neighboring gene transmembrane protein 63C Neighboring gene uncharacterized LOC106999503 Neighboring gene microRNA mir-7195 Neighboring gene neuroglobin Neighboring gene glutathione S-transferase zeta 1 Neighboring gene transmembrane p24 trafficking protein family member 8 Neighboring gene sterile alpha motif domain containing 15

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables dolichyl-phosphate-mannose-protein mannosyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in protein O-linked mannosylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in endoplasmic reticulum IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    protein O-mannosyl-transferase 2
    NP_001247555.1
    XP_014999665.2
    XP_014999666.2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001260626.1 → NP_001247555.1  protein O-mannosyl-transferase 2

      See identical proteins and their annotated locations for NP_001247555.1

      Status: PROVISIONAL

      Source sequence(s)
      JV043419
      UniProtKB/TrEMBL
      F7AWV6, H9EVS6
      Related
      ENSMMUP00000032704.3, ENSMMUT00000039639.3
      Conserved Domains (4) summary
      smart00472
      Location:404 → 459
      MIR; Domain in ryanodine and inositol trisphosphate receptors and protein O-mannosyltransferases
      COG1928
      Location:60 → 750
      PMT1; Dolichyl-phosphate-mannose--protein O-mannosyl transferase [Posttranslational modification, protein turnover, chaperones]
      pfam02366
      Location:62 → 306
      PMT; Dolichyl-phosphate-mannose-protein mannosyltransferase
      pfam16192
      Location:538 → 748
      PMT_4TMC; C-terminal four TMM region of protein-O-mannosyltransferase

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041760.1 Reference Mmul_10 Primary Assembly

      Range
      139381447..139429525 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015144179.2 → XP_014999665.2  protein O-mannosyl-transferase 2 isoform X1

      UniProtKB/TrEMBL
      F6QLM4, F7AWV6
      Related
      ENSMMUP00000001459.3, ENSMMUT00000001552.4
      Conserved Domains (1) summary
      COG1928
      Location:60 → 715
      PMT1; Dolichyl-phosphate-mannose--protein O-mannosyl transferase [Posttranslational modification, protein turnover, chaperones]

    2. XM_015144180.2 → XP_014999666.2  protein O-mannosyl-transferase 2 isoform X2

      UniProtKB/TrEMBL
      F7AWV6
      Conserved Domains (1) summary
      COG1928
      Location:1 → 639
      PMT1; Dolichyl-phosphate-mannose--protein O-mannosyl transferase [Posttranslational modification, protein turnover, chaperones]

    RNA

    1. XR_001446352.2 RNA Sequence

    2. XR_003730912.1 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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    Research Materials