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    FAM13A family with sequence similarity 13 member A [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 703335, updated on 17-Aug-2024

    Summary

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    Official Symbol
    FAM13Aprovided by VGNC
    Official Full Name
    family with sequence similarity 13 member Aprovided by VGNC
    Primary source
    VGNC:VGNC:72299
    See related
    Ensembl:ENSMMUG00000010141
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See FAM13A in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    27
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 5 NC_041758.1 (87114738..87490202, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 5 NC_027897.1 (87133982..87258390, complement)

    Chromosome 5 - NC_041758.1Genomic Context describing neighboring genes Neighboring gene leukocyte surface antigen CD53 pseudogene Neighboring gene nuclear receptor coactivator 4 pseudogene Neighboring gene HECT and RLD domain containing E3 ubiquitin protein ligase 3 Neighboring gene nucleosome assembly protein 1 like 5 Neighboring gene ubiquitin-60S ribosomal protein L40 pseudogene Neighboring gene 40S ribosomal protein S4, Y-like Neighboring gene U6 spliceosomal RNA Neighboring gene tigger transposable element derived 2

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in signal transduction IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    protein FAM13A

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041758.1 Reference Mmul_10 Primary Assembly

      Range
      87114738..87490202 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028848614.1 → XP_028704447.1  protein FAM13A isoform X3

      UniProtKB/TrEMBL
      G7MTD9
      Related
      ENSMMUP00000023890.4, ENSMMUT00000025533.4
      Conserved Domains (2) summary
      cd04393
      Location:19 → 206
      RhoGAP_FAM13A1a; RhoGAP (GTPase-activator protein [GAP] for Rho-like small GTPases) domain of FAM13A1, isoform a-like proteins. The function of FAM13A1a is unknown. Small GTPases cluster into distinct families, and all act as molecular switches, active in their GTP-bound ...
      pfam12361
      Location:296 → 498
      DBP; Duffy-antigen binding protein

    2. XM_028848613.1 → XP_028704446.1  protein FAM13A isoform X2

      UniProtKB/TrEMBL
      G7MTD9
      Related
      ENSMMUP00000046000.2, ENSMMUT00000054010.2
      Conserved Domains (2) summary
      cd04393
      Location:39 → 226
      RhoGAP_FAM13A1a; RhoGAP (GTPase-activator protein [GAP] for Rho-like small GTPases) domain of FAM13A1, isoform a-like proteins. The function of FAM13A1a is unknown. Small GTPases cluster into distinct families, and all act as molecular switches, active in their GTP-bound ...
      pfam12361
      Location:368 → 504
      DBP; Duffy-antigen binding protein

    3. XM_028848615.1 → XP_028704448.1  protein FAM13A isoform X4

      UniProtKB/TrEMBL
      F6QXF1, G7MTD9
      Related
      ENSMMUP00000013263.4, ENSMMUT00000014161.4
      Conserved Domains (2) summary
      cd04393
      Location:39 → 226
      RhoGAP_FAM13A1a; RhoGAP (GTPase-activator protein [GAP] for Rho-like small GTPases) domain of FAM13A1, isoform a-like proteins. The function of FAM13A1a is unknown. Small GTPases cluster into distinct families, and all act as molecular switches, active in their GTP-bound ...
      pfam12361
      Location:316 → 518
      DBP; Duffy-antigen binding protein

    4. XM_028848612.1 → XP_028704445.1  protein FAM13A isoform X1

      UniProtKB/TrEMBL
      G7MTD9
      Conserved Domains (2) summary
      cd04393
      Location:39 → 226
      RhoGAP_FAM13A1a; RhoGAP (GTPase-activator protein [GAP] for Rho-like small GTPases) domain of FAM13A1, isoform a-like proteins. The function of FAM13A1a is unknown. Small GTPases cluster into distinct families, and all act as molecular switches, active in their GTP-bound ...
      pfam12361
      Location:316 → 518
      DBP; Duffy-antigen binding protein

    5. XM_015138773.2 → XP_014994259.2  protein FAM13A isoform X6

      UniProtKB/TrEMBL
      H9F4Q3
      Conserved Domains (1) summary
      pfam12361
      Location:107 → 309
      DBP; Duffy-antigen binding protein

    6. XM_028848616.1 → XP_028704449.1  protein FAM13A isoform X5

      UniProtKB/TrEMBL
      A0A1D5QJR1, G7MTD9
      Related
      ENSMMUP00000048284.2, ENSMMUT00000075637.2
      Conserved Domains (3) summary
      pfam12361
      Location:265 → 467
      DBP; Duffy-antigen binding protein
      pfam15905
      Location:566 → 768
      HMMR_N; Hyaluronan mediated motility receptor N-terminal
      cl02570
      Location:22 → 175
      RhoGAP; GTPase-activator protein (GAP) for Rho-like GTPases; GAPs towards Rho/Rac/Cdc42-like small GTPases. Small GTPases (G proteins) cluster into distinct families, and all act as molecular switches, active in their GTP-bound form but inactive when bound to ...

    7. XM_015138774.2 → XP_014994260.1  protein FAM13A isoform X7

      UniProtKB/TrEMBL
      A0A1D5QKZ7, H9F4Q3
      Related
      ENSMMUP00000048722.2, ENSMMUT00000071307.2
      Conserved Domains (1) summary
      pfam12361
      Location:56 → 192
      DBP; Duffy-antigen binding protein

    8. XM_015138776.2 → XP_014994262.1  protein FAM13A isoform X8

      UniProtKB/TrEMBL
      H9F4Q3
      Conserved Domains (1) summary
      pfam12361
      Location:42 → 178
      DBP; Duffy-antigen binding protein

    9. XM_028848617.1 → XP_028704450.1  protein FAM13A isoform X9

      UniProtKB/TrEMBL
      H9F4Q3
      Conserved Domains (1) summary
      pfam12361
      Location:28 → 164
      DBP; Duffy-antigen binding protein
    Nucleotide Protein
    Heading Accession and Version

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