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    GTF2A1 general transcription factor IIA subunit 1 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 708130, updated on 17-Aug-2024

    Summary

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    Official Symbol
    GTF2A1provided by VGNC
    Official Full Name
    general transcription factor IIA subunit 1provided by VGNC
    Primary source
    VGNC:VGNC:73305
    See related
    Ensembl:ENSMMUG00000022122
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See GTF2A1 in Genome Data Viewer
    Location:
    chromosome: 7
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 7 NC_041760.1 (143301379..143349730, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 7 NC_027899.1 (143680038..143725658, complement)

    Chromosome 7 - NC_041760.1Genomic Context describing neighboring genes Neighboring gene protein BHLHb9-like Neighboring gene thyroid stimulating hormone receptor Neighboring gene nicotinamide/nicotinic acid mononucleotide adenylyltransferase 1 pseudogene Neighboring gene small nucleolar RNA SNORA79 Neighboring gene uracil-DNA glycosylase pseudogene Neighboring gene stonin 2 Neighboring gene 40S ribosomal protein S24 pseudogene

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in transcription initiation at RNA polymerase II promoter IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of transcription factor TFIIA complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    transcription initiation factor IIA subunit 1
    Names
    general transcription factor IIA, 1, 19/37kDa

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001257710.2 → NP_001244639.1  transcription initiation factor IIA subunit 1

      See identical proteins and their annotated locations for NP_001244639.1

      Status: PROVISIONAL

      Source sequence(s)
      JU320265
      UniProtKB/TrEMBL
      F7H5J8, F7H5K0, I0FLS7
      Related
      ENSMMUP00000029130.4, ENSMMUT00000031121.4
      Conserved Domains (1) summary
      pfam03153
      Location:13 → 376
      TFIIA; Transcription factor IIA, alpha/beta subunit

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041760.1 Reference Mmul_10 Primary Assembly

      Range
      143301379..143349730 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028850342.1 → XP_028706175.1  transcription initiation factor IIA subunit 1 isoform X2

      UniProtKB/TrEMBL
      G7MYX9
      Conserved Domains (1) summary
      pfam03153
      Location:1 → 337
      TFIIA; Transcription factor IIA, alpha/beta subunit

    2. XM_015144262.2 → XP_014999748.1  transcription initiation factor IIA subunit 1 isoform X2

      UniProtKB/TrEMBL
      G7MYX9
      Conserved Domains (1) summary
      pfam03153
      Location:1 → 337
      TFIIA; Transcription factor IIA, alpha/beta subunit

    3. XM_015144263.2 → XP_014999749.1  transcription initiation factor IIA subunit 1 isoform X3

      UniProtKB/TrEMBL
      G7MYX9
      Conserved Domains (1) summary
      pfam03153
      Location:126 → 326
      TFIIA; Transcription factor IIA, alpha/beta subunit

    4. XM_028850341.1 → XP_028706174.1  transcription initiation factor IIA subunit 1 isoform X1

      UniProtKB/TrEMBL
      A0A1D5QTP5, F7H5J8
      Related
      ENSMMUP00000051425.2, ENSMMUT00000070090.2
      Conserved Domains (1) summary
      pfam03153
      Location:13 → 347
      TFIIA; Transcription factor IIA, alpha/beta subunit
    Nucleotide Protein
    Heading Accession and Version

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