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    SNAPC5 small nuclear RNA activating complex polypeptide 5 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 710777, updated on 17-Aug-2024

    Summary

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    Official Symbol
    SNAPC5provided by VGNC
    Official Full Name
    small nuclear RNA activating complex polypeptide 5provided by VGNC
    Primary source
    VGNC:VGNC:77712
    Locus tag
    EGK_17611
    See related
    Ensembl:ENSMMUG00000060148
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See SNAPC5 in Genome Data Viewer
    Location:
    chromosome: 7
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 7 NC_041760.1 (43089522..43094879, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 7 NC_027899.1 (43237684..43241010, complement)

    Chromosome 7 - NC_041760.1Genomic Context describing neighboring genes Neighboring gene DIS3 like exosome 3'-5' exoribonuclease Neighboring gene small Cajal body-specific RNA 14 Neighboring gene TIMELESS interacting protein Neighboring gene mitogen-activated protein kinase kinase 1 Neighboring gene small nucleolar RNA SNORD18 Neighboring gene small nucleolar RNA SNORD18 Neighboring gene ribosomal protein L4

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequencing and comparison of two nonhuman primate animal models, the cynomolgus and Chinese rhesus macaques. Yan G, et al. Nat Biotechnol, 2011 Oct 16. PMID 22002653
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in transcription initiation at RNA polymerase III promoter IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    snRNA-activating protein complex subunit 5
    Names
    small nuclear RNA activating complex, polypeptide 5, 19kDa

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001261252.1 → NP_001248181.1  snRNA-activating protein complex subunit 5

      See identical proteins and their annotated locations for NP_001248181.1

      Status: PROVISIONAL

      Source sequence(s)
      JV045538
      UniProtKB/TrEMBL
      A0A8J8XJH3, F7C380, G7MXV8, H9F0Y6
      Related
      ENSMMUP00000066613.1, ENSMMUT00000082167.1
      Conserved Domains (1) summary
      pfam15497
      Location:8 → 80
      SNAPc19; snRNA-activating protein complex subunit 19, SNAPc subunit 19

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041760.1 Reference Mmul_10 Primary Assembly

      Range
      43089522..43094879 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028850403.1 → XP_028706236.1  snRNA-activating protein complex subunit 5 isoform X1

      Conserved Domains (1) summary
      pfam15497
      Location:8 → 50
      SNAPc19; snRNA-activating protein complex subunit 19, SNAPc subunit 19

    2. XM_028850404.1 → XP_028706237.1  snRNA-activating protein complex subunit 5 isoform X2

      Conserved Domains (1) summary
      pfam15497
      Location:1 → 42
      SNAPc19; snRNA-activating protein complex subunit 19, SNAPc subunit 19

    RNA

    1. XR_003730932.1 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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    Research Materials