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    COPG2 COPI coat complex subunit gamma 2 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 707516, updated on 17-Aug-2024

    Summary

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    Official Symbol
    COPG2provided by VGNC
    Official Full Name
    COPI coat complex subunit gamma 2provided by VGNC
    Primary source
    VGNC:VGNC:71315
    See related
    Ensembl:ENSMMUG00000004801
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See COPG2 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    27
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 3 NC_041756.1 (156807468..156968819, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 3 NC_027895.1 (156625147..156773338, complement)

    Chromosome 3 - NC_041756.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC114677132 Neighboring gene mesoderm specific transcript Neighboring gene microRNA mir-335 Neighboring gene uncharacterized LOC114677029 Neighboring gene uncharacterized LOC106997661 Neighboring gene glutamyl-tRNA(Gln) amidotransferase subunit C, mitochondrial pseudogene Neighboring gene testis specific 13 Neighboring gene uncharacterized LOC106997662 Neighboring gene KLF transcription factor 14 Neighboring gene uncharacterized LOC114677030

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables structural molecule activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in endoplasmic reticulum to Golgi vesicle-mediated transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in intra-Golgi vesicle-mediated transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in intracellular protein transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in organelle transport along microtubule IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in protein secretion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of COPI vesicle coat IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in Golgi membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in endoplasmic reticulum IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in endoplasmic reticulum-Golgi intermediate compartment IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    coatomer subunit gamma-2
    Names
    coatomer protein complex subunit gamma 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041756.1 Reference Mmul_10 Primary Assembly

      Range
      156807468..156968819 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015134921.2 → XP_014990407.1  coatomer subunit gamma-2 isoform X2

      UniProtKB/TrEMBL
      A0A1D5RIP7, A0A5F7ZZL7
      Related
      ENSMMUP00000070104.1, ENSMMUT00000083707.1
      Conserved Domains (5) summary
      COG5240
      Location:7 → 866
      SEC21; Vesicle coat complex COPI, gamma subunit [Intracellular trafficking and secretion]
      pfam08752
      Location:613 → 756
      COP-gamma_platf; Coatomer gamma subunit appendage platform subdomain
      pfam11701
      Location:325 → 497
      UNC45-central; Myosin-binding striated muscle assembly central
      pfam16381
      Location:758 → 870
      Coatomer_g_Cpla; Coatomer subunit gamma-1 C-terminal appendage platform
      sd00044
      Location:398 → 423
      HEAT; HEAT repeat [structural motif]

    2. XM_015134920.2 → XP_014990406.1  coatomer subunit gamma-2 isoform X1

      UniProtKB/TrEMBL
      A0A1D5RIP7, F6S6K6
      Related
      ENSMMUP00000006382.3, ENSMMUT00000006786.4
      Conserved Domains (5) summary
      COG5240
      Location:7 → 877
      SEC21; Vesicle coat complex COPI, gamma subunit [Intracellular trafficking and secretion]
      pfam08752
      Location:624 → 767
      COP-gamma_platf; Coatomer gamma subunit appendage platform subdomain
      pfam11701
      Location:336 → 508
      UNC45-central; Myosin-binding striated muscle assembly central
      pfam16381
      Location:769 → 881
      Coatomer_g_Cpla; Coatomer subunit gamma-1 C-terminal appendage platform
      sd00044
      Location:409 → 434
      HEAT; HEAT repeat [structural motif]

    3. XM_028846298.1 → XP_028702131.1  coatomer subunit gamma-2 isoform X4

      UniProtKB/TrEMBL
      A0A1D5QXL9, G7MMD8
      Related
      ENSMMUP00000052799.2, ENSMMUT00000074151.2
      Conserved Domains (2) summary
      COG5240
      Location:1 → 794
      SEC21; Vesicle coat complex COPI, gamma subunit [Intracellular trafficking and secretion]
      sd00044
      Location:326 → 351
      HEAT; HEAT repeat [structural motif]

    4. XM_015134922.2 → XP_014990408.1  coatomer subunit gamma-2 isoform X3

      UniProtKB/TrEMBL
      G7MMD8
      Conserved Domains (5) summary
      COG5240
      Location:1 → 805
      SEC21; Vesicle coat complex COPI, gamma subunit [Intracellular trafficking and secretion]
      pfam08752
      Location:552 → 695
      COP-gamma_platf; Coatomer gamma subunit appendage platform subdomain
      pfam11701
      Location:264 → 436
      UNC45-central; Myosin-binding striated muscle assembly central
      pfam16381
      Location:697 → 809
      Coatomer_g_Cpla; Coatomer subunit gamma-1 C-terminal appendage platform
      sd00044
      Location:337 → 362
      HEAT; HEAT repeat [structural motif]

    5. XM_015134923.2 → XP_014990409.1  coatomer subunit gamma-2 isoform X5

      UniProtKB/TrEMBL
      G7MMD8
      Conserved Domains (5) summary
      pfam08752
      Location:512 → 655
      COP-gamma_platf; Coatomer gamma subunit appendage platform subdomain
      pfam11701
      Location:224 → 396
      UNC45-central; Myosin-binding striated muscle assembly central
      pfam13646
      Location:190 → 285
      HEAT_2; HEAT repeats
      pfam16381
      Location:657 → 769
      Coatomer_g_Cpla; Coatomer subunit gamma-1 C-terminal appendage platform
      sd00044
      Location:297 → 322
      HEAT; HEAT repeat [structural motif]
    Nucleotide Protein
    Heading Accession and Version

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