U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    DCLRE1A DNA cross-link repair 1A [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 697882, updated on 17-Aug-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    DCLRE1Aprovided by VGNC
    Official Full Name
    DNA cross-link repair 1Aprovided by VGNC
    Primary source
    VGNC:VGNC:71648
    See related
    Ensembl:ENSMMUG00000016644
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See DCLRE1A in Genome Data Viewer
    Location:
    chromosome: 9
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 9 NC_041762.1 (114365751..114385059, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 9 NC_027901.1 (109737590..109757057, complement)

    Chromosome 9 - NC_041762.1Genomic Context describing neighboring genes Neighboring gene pleckstrin homology domain containing S1 Neighboring gene small nucleolar RNA SNORA17 Neighboring gene NHL repeat containing 2 Neighboring gene uncharacterized LOC114670146

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables 5'-3' DNA exonuclease activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables damaged DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in double-strand break repair via nonhomologous end joining IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in interstrand cross-link repair IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in protection from non-homologous end joining at telomere IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    DNA cross-link repair 1A protein
    Names
    DNA cross-link repair 1A (PSO2 homolog, S. cerevisiae)
    XP_015003704.2
    XP_015003706.2

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041762.1 Reference Mmul_10 Primary Assembly

      Range
      114365751..114385059 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015148218.2 → XP_015003704.2  DNA cross-link repair 1A protein

      UniProtKB/TrEMBL
      A0A5S6RAW1, A0A8J8XNQ8, F6TV24, G7N161, H9G2N5
      Related
      ENSMMUP00000021889.2, ENSMMUT00000023393.3
      Conserved Domains (2) summary
      pfam07522
      Location:913 → 1018
      DRMBL; DNA repair metallo-beta-lactamase
      cl23716
      Location:688 → 843
      metallo-hydrolase-like_MBL-fold; mainly hydrolytic enzymes and related proteins which carry out various biological functions; MBL-fold metallohydrolase domain

    2. XM_015148220.2 → XP_015003706.2  DNA cross-link repair 1A protein

      UniProtKB/TrEMBL
      A0A5S6RAW1, A0A8J8XNQ8, F6TV24, G7N161, H9G2N5
      Conserved Domains (2) summary
      pfam07522
      Location:913 → 1018
      DRMBL; DNA repair metallo-beta-lactamase
      cl23716
      Location:688 → 843
      metallo-hydrolase-like_MBL-fold; mainly hydrolytic enzymes and related proteins which carry out various biological functions; MBL-fold metallohydrolase domain

    RNA

    1. XR_003719479.1 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.