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    TSG101 tumor susceptibility 101 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 693787, updated on 17-Aug-2024

    Summary

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    Official Symbol
    TSG101provided by VGNC
    Official Full Name
    tumor susceptibility 101provided by VGNC
    Primary source
    VGNC:VGNC:78998
    Locus tag
    EGK_06430
    See related
    Ensembl:ENSMMUG00000014613
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See TSG101 in Genome Data Viewer
    Location:
    chromosome: 14
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 14 NC_041767.1 (47040967..47092442)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 14 NC_027906.1 (47801550..47853004)

    Chromosome 14 - NC_041767.1Genomic Context describing neighboring genes Neighboring gene mitochondrial carrier homolog 1 pseudogene Neighboring gene UEV and lactate/malate dehyrogenase domains Neighboring gene 14-3-3 protein beta/alpha pseudogene Neighboring gene lactate dehydrogenase A like 6A Neighboring gene lactate dehydrogenase C Neighboring gene protein S100-A11

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Polymorphisms in eight host genes associated with control of HIV replication do not mediate elite control of viral replication in SIV-infected Indian rhesus macaques. Weiler A, et al. Immunogenetics, 2006 Dec. PMID 17106666
    2. Analysis of the Macaca mulatta transcriptome and the sequence divergence between Macaca and human. Magness CL, et al. Genome Biol, 2005. PMID 15998449, Free PMC Article
    3. Genome sequencing and comparison of two nonhuman primate animal models, the cynomolgus and Chinese rhesus macaques. Yan G, et al. Nat Biotechnol, 2011 Oct 16. PMID 22002653
    4. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    5. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ubiquitin binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in endosome to lysosome transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in protein modification process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in protein transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of ESCRT I complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    tumor susceptibility gene 101 protein
    Names
    ESCRT-I complex subunit TSG101
    tumor susceptibility protein 101

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001195481.1 → NP_001182410.1  tumor susceptibility gene 101 protein

      See identical proteins and their annotated locations for NP_001182410.1

      Status: VALIDATED

      Source sequence(s)
      CN644066, CN645260
      UniProtKB/TrEMBL
      A0A5F7ZAZ4, A0A8J8XCK1, G7NDS4, H9FZ74
      Related
      ENSMMUP00000062354.1, ENSMMUT00000098874.1
      Conserved Domains (3) summary
      pfam05743
      Location:21 → 139
      UEV; UEV domain
      pfam07798
      Location:236 → 292
      DUF1640; Protein of unknown function (DUF1640)
      pfam09454
      Location:316 → 375
      Vps23_core; Vps23 core domain

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041767.1 Reference Mmul_10 Primary Assembly

      Range
      47040967..47092442
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015114617.2 → XP_014970103.1  tumor susceptibility gene 101 protein isoform X1

      UniProtKB/TrEMBL
      Q09HC4
      Conserved Domains (3) summary
      pfam05743
      Location:1 → 87
      UEV; UEV domain
      pfam07798
      Location:184 → 240
      DUF1640; Protein of unknown function (DUF1640)
      pfam09454
      Location:264 → 323
      Vps23_core; Vps23 core domain
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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    Research Materials