U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    HTATIP2 HIV-1 Tat interactive protein 2 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 701908, updated on 5-Mar-2024

    Summary

    Go to the top of the page Help
    Gene symbol
    HTATIP2
    Gene description
    HIV-1 Tat interactive protein 2
    See related
    Ensembl:ENSMMUG00000010719
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See HTATIP2 in Genome Data Viewer
    Location:
    chromosome: 14
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 14 NC_041767.1 (45193607..45211997, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 14 NC_027906.1 (45898950..45917319, complement)

    Chromosome 14 - NC_041767.1Genomic Context describing neighboring genes Neighboring gene sodium- and chloride-dependent glycine transporter 2 pseudogene Neighboring gene protein arginine methyltransferase 3 Neighboring gene uncharacterized LOC114672310 Neighboring gene developing brain homeobox 1 Neighboring gene neuron navigator 2

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables NAD binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in import into nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    oxidoreductase HTATIP2
    Names
    HIV-1 Tat interactive protein 2, 30kDa
    XP_001093563.2
    XP_014970121.1
    XP_014970122.1

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041767.1 Reference Mmul_10 Primary Assembly

      Range
      45193607..45211997 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015114635.2 → XP_014970121.1  oxidoreductase HTATIP2 isoform X2

      UniProtKB/TrEMBL
      A0A1D5R436
      Conserved Domains (2) summary
      cd05250
      Location:19 → 231
      CC3_like_SDR_a; CC3(TIP30)-like, atypical (a) SDRs
      COG0702
      Location:21 → 193
      YbjT; Uncharacterized conserved protein YbjT, contains NAD(P)-binding and DUF2867 domains [General function prediction only]

    2. XM_015114636.2 → XP_014970122.1  oxidoreductase HTATIP2 isoform X2

      UniProtKB/TrEMBL
      A0A1D5R436
      Conserved Domains (2) summary
      cd05250
      Location:19 → 231
      CC3_like_SDR_a; CC3(TIP30)-like, atypical (a) SDRs
      COG0702
      Location:21 → 193
      YbjT; Uncharacterized conserved protein YbjT, contains NAD(P)-binding and DUF2867 domains [General function prediction only]

    3. XM_001093563.4 → XP_001093563.2  oxidoreductase HTATIP2 isoform X1

      UniProtKB/TrEMBL
      F7G5D3
      Related
      ENSMMUP00000014044.4, ENSMMUT00000014989.4
      Conserved Domains (1) summary
      cd05250
      Location:52 → 264
      CC3_like_SDR_a; CC3(TIP30)-like, atypical (a) SDRs
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials