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    STN1 STN1 subunit of CST complex [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 714968, updated on 17-Aug-2024

    Summary

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    Official Symbol
    STN1provided by VGNC
    Official Full Name
    STN1 subunit of CST complexprovided by VGNC
    Primary source
    VGNC:VGNC:78219
    See related
    Ensembl:ENSMMUG00000015323
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Also known as
    OBFC1
    Orthologs
    human mouse all
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    Genomic context

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    See STN1 in Genome Data Viewer
    Location:
    chromosome: 9
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 9 NC_041762.1 (104441532..104479977, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 9 NC_027901.1 (99701297..99738285, complement)

    Chromosome 9 - NC_041762.1Genomic Context describing neighboring genes Neighboring gene SH3 and PX domains 2A Neighboring gene uncharacterized LOC114670031 Neighboring gene uncharacterized LOC114670143 Neighboring gene STE20 like kinase Neighboring gene microRNA mir-936

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables single-stranded telomeric DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in DNA replication IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in double-strand break repair via homologous recombination IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in nucleotide-excision repair IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in telomere capping IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of CST complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of DNA replication factor A complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in chromosome, telomeric region IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in site of double-strand break IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    CST complex subunit STN1
    Names
    STN1, CST complex subunit
    oligonucleotide/oligosaccharide binding fold containing 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001266590.1 → NP_001253519.1  CST complex subunit STN1

      See identical proteins and their annotated locations for NP_001253519.1

      Status: PROVISIONAL

      Source sequence(s)
      JV636384
      UniProtKB/TrEMBL
      A0A8J8XDQ4, F6PY41, G7N127, H9EWF7
      Related
      ENSMMUP00000065472.1, ENSMMUT00000080143.1
      Conserved Domains (2) summary
      cd04483
      Location:58 → 155
      hOBFC1_like; A subfamily of OB folds similar to that found in human OB fold containing protein 1 (hOBFC1). Members of this group belong to the Replication protein A subunit 2 (RPA2) family of OB folds. RPA is a nuclear ssDNA binding protein (SSB) which appears to be ...
      pfam09170
      Location:157 → 333
      STN1_2; CST, Suppressor of cdc thirteen homolog, complex subunit STN1

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041762.1 Reference Mmul_10 Primary Assembly

      Range
      104441532..104479977 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028853528.1 → XP_028709361.1  CST complex subunit STN1 isoform X1

      UniProtKB/TrEMBL
      A0A8J8XDQ4, G7N127, H9EWF7
      Conserved Domains (2) summary
      cd04483
      Location:58 → 155
      hOBFC1_like; A subfamily of OB folds similar to that found in human OB fold containing protein 1 (hOBFC1). Members of this group belong to the Replication protein A subunit 2 (RPA2) family of OB folds. RPA is a nuclear ssDNA binding protein (SSB) which appears to be ...
      pfam09170
      Location:157 → 317
      STN1_2; CST, Suppressor of cdc thirteen homolog, complex subunit STN1

    2. XM_028853530.1 → XP_028709363.1  CST complex subunit STN1 isoform X1

      UniProtKB/TrEMBL
      A0A8J8XDQ4, G7N127, H9EWF7
      Conserved Domains (2) summary
      cd04483
      Location:58 → 155
      hOBFC1_like; A subfamily of OB folds similar to that found in human OB fold containing protein 1 (hOBFC1). Members of this group belong to the Replication protein A subunit 2 (RPA2) family of OB folds. RPA is a nuclear ssDNA binding protein (SSB) which appears to be ...
      pfam09170
      Location:157 → 317
      STN1_2; CST, Suppressor of cdc thirteen homolog, complex subunit STN1

    3. XM_028853529.1 → XP_028709362.1  CST complex subunit STN1 isoform X1

      UniProtKB/TrEMBL
      A0A8J8XDQ4, G7N127, H9EWF7
      Conserved Domains (2) summary
      cd04483
      Location:58 → 155
      hOBFC1_like; A subfamily of OB folds similar to that found in human OB fold containing protein 1 (hOBFC1). Members of this group belong to the Replication protein A subunit 2 (RPA2) family of OB folds. RPA is a nuclear ssDNA binding protein (SSB) which appears to be ...
      pfam09170
      Location:157 → 317
      STN1_2; CST, Suppressor of cdc thirteen homolog, complex subunit STN1

    4. XM_028853531.1 → XP_028709364.1  CST complex subunit STN1 isoform X2

      UniProtKB/TrEMBL
      A0A8J8XDQ4, F6PY41, G7N127, H9EWF7
      Related
      ENSMMUP00000020094.2, ENSMMUT00000021485.4
      Conserved Domains (2) summary
      cd04483
      Location:58 → 155
      hOBFC1_like; A subfamily of OB folds similar to that found in human OB fold containing protein 1 (hOBFC1). Members of this group belong to the Replication protein A subunit 2 (RPA2) family of OB folds. RPA is a nuclear ssDNA binding protein (SSB) which appears to be ...
      pfam09170
      Location:157 → 333
      STN1_2; CST, Suppressor of cdc thirteen homolog, complex subunit STN1

    5. XM_028853532.1 → XP_028709365.1  CST complex subunit STN1 isoform X3

      UniProtKB/TrEMBL
      A0A8J8XDQ4, G7N127, H9EWF7
      Conserved Domains (2) summary
      cd04483
      Location:58 → 155
      hOBFC1_like; A subfamily of OB folds similar to that found in human OB fold containing protein 1 (hOBFC1). Members of this group belong to the Replication protein A subunit 2 (RPA2) family of OB folds. RPA is a nuclear ssDNA binding protein (SSB) which appears to be ...
      pfam09170
      Location:157 → 316
      STN1_2; CST, Suppressor of cdc thirteen homolog, complex subunit STN1

    6. XM_028853533.1 → XP_028709366.1  CST complex subunit STN1 isoform X4

      UniProtKB/TrEMBL
      A0A8J8XDQ4, G7N127, H9EWF7
      Conserved Domains (2) summary
      cd04483
      Location:58 → 155
      hOBFC1_like; A subfamily of OB folds similar to that found in human OB fold containing protein 1 (hOBFC1). Members of this group belong to the Replication protein A subunit 2 (RPA2) family of OB folds. RPA is a nuclear ssDNA binding protein (SSB) which appears to be ...
      pfam09170
      Location:157 → 316
      STN1_2; CST, Suppressor of cdc thirteen homolog, complex subunit STN1
    Nucleotide Protein
    Heading Accession and Version

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