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    NEDD9 neural precursor cell expressed, developmentally down-regulated 9 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 699359, updated on 17-Aug-2024

    Summary

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    Official Symbol
    NEDD9provided by VGNC
    Official Full Name
    neural precursor cell expressed, developmentally down-regulated 9provided by VGNC
    Primary source
    VGNC:VGNC:75304
    See related
    Ensembl:ENSMMUG00000016135
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See NEDD9 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 4 NC_041757.1 (158623840..158824365)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 4 NC_027896.1 (11382626..11583088, complement)

    Chromosome 4 - NC_041757.1Genomic Context describing neighboring genes Neighboring gene transmembrane protein 170B Neighboring gene U1 spliceosomal RNA Neighboring gene uncharacterized LOC114677708 Neighboring gene small integral membrane protein 13 Neighboring gene endogenous retrovirus group FRD member 1, envelope Neighboring gene uncharacterized LOC106997790 Neighboring gene small nucleolar RNA U13

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cell migration IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in cell surface receptor protein tyrosine kinase signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    enhancer of filamentation 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041757.1 Reference Mmul_10 Primary Assembly

      Range
      158623840..158824365
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001088846.4 → XP_001088846.2  enhancer of filamentation 1 isoform X2

      UniProtKB/TrEMBL
      A0A1D5Q6P5, A0A1D5QRF9
      Related
      ENSMMUP00000050637.2, ENSMMUT00000066301.2
      Conserved Domains (3) summary
      cd11550
      Location:401 → 562
      Serine_rich_NEDD9; Serine rich Four helix bundle domain of CAS (Crk-Associated Substrate) scaffolding protein, Neural precursor cell Expressed, Developmentally Down-regulated 9; a protein interaction module
      cd12002
      Location:7 → 63
      SH3_NEDD9; Src homology 3 domain of CAS (Crk-Associated Substrate) scaffolding protein family member, Neural precursor cell Expressed, Developmentally Down-regulated 9
      pfam12026
      Location:621 → 828
      DUF3513; Domain of unknown function (DUF3513)

    2. XM_015135537.2 → XP_014991023.2  enhancer of filamentation 1 isoform X3

      UniProtKB/TrEMBL
      A0A1D5Q6P5
      Conserved Domains (2) summary
      cd11550
      Location:252 → 413
      Serine_rich_NEDD9; Serine rich Four helix bundle domain of CAS (Crk-Associated Substrate) scaffolding protein, Neural precursor cell Expressed, Developmentally Down-regulated 9; a protein interaction module
      pfam12026
      Location:472 → 679
      DUF3513; Domain of unknown function (DUF3513)

    3. XM_001089291.4 → XP_001089291.2  enhancer of filamentation 1 isoform X1

      UniProtKB/TrEMBL
      A0A1D5Q6P5, F7FQI6
      Related
      ENSMMUP00000021222.3, ENSMMUT00000022684.4
      Conserved Domains (3) summary
      cd11550
      Location:401 → 562
      Serine_rich_NEDD9; Serine rich Four helix bundle domain of CAS (Crk-Associated Substrate) scaffolding protein, Neural precursor cell Expressed, Developmentally Down-regulated 9; a protein interaction module
      cd12002
      Location:7 → 63
      SH3_NEDD9; Src homology 3 domain of CAS (Crk-Associated Substrate) scaffolding protein family member, Neural precursor cell Expressed, Developmentally Down-regulated 9
      pfam12026
      Location:621 → 828
      DUF3513; Domain of unknown function (DUF3513)
    Nucleotide Protein
    Heading Accession and Version

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