U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    SHC1 SHC adaptor protein 1 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 718982, updated on 17-Aug-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    SHC1provided by VGNC
    Official Full Name
    SHC adaptor protein 1provided by VGNC
    Primary source
    VGNC:VGNC:77209
    See related
    Ensembl:ENSMMUG00000006581
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See SHC1 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    13
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 1 NC_041754.1 (96058310..96070871)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 1 NC_027893.1 (129656147..129668799, complement)

    Chromosome 1 - NC_041754.1Genomic Context describing neighboring genes Neighboring gene flavin adenine dinucleotide synthetase 1 Neighboring gene CDC28 protein kinase regulatory subunit 1B Neighboring gene PYGO2 and SHC1 antisense RNA 1 Neighboring gene pygopus family PHD finger 2 Neighboring gene PBX homeobox interacting protein 1

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables receptor tyrosine kinase binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cell surface receptor protein tyrosine kinase signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in intracellular signal transduction IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    SHC-transforming protein 1

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001261487.1 → NP_001248416.1  SHC-transforming protein 1

      See identical proteins and their annotated locations for NP_001248416.1

      Status: PROVISIONAL

      Source sequence(s)
      JV047941
      UniProtKB/TrEMBL
      F7HPR8, G7MDV1, I2CUU8
      Related
      ENSMMUP00000008658.4, ENSMMUT00000009214.4
      Conserved Domains (2) summary
      cd09925
      Location:481 → 584
      SH2_SHC; Src homology 2 (SH2) domain found in SH2 adaptor protein C (SHC)
      cd01209
      Location:146 → 317
      PTB_Shc; Shc-like phosphotyrosine-binding (PTB) domain

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041754.1 Reference Mmul_10 Primary Assembly

      Range
      96058310..96070871
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015110167.2 → XP_014965653.1  SHC-transforming protein 1 isoform X2

      UniProtKB/TrEMBL
      H9F7S1
      Conserved Domains (2) summary
      cd09925
      Location:371 → 474
      SH2_SHC; Src homology 2 (SH2) domain found in SH2 adaptor protein C (SHC)
      cd01209
      Location:36 → 207
      PTB_Shc; Shc-like phosphotyrosine-binding (PTB) domain

    2. XM_028846070.1 → XP_028701903.1  SHC-transforming protein 1 isoform X3

      UniProtKB/TrEMBL
      H9F7S1
      Conserved Domains (2) summary
      cd09925
      Location:370 → 473
      SH2_SHC; Src homology 2 (SH2) domain found in SH2 adaptor protein C (SHC)
      cd01209
      Location:36 → 207
      PTB_Shc; Shc-like phosphotyrosine-binding (PTB) domain

    3. XM_015110149.2 → XP_014965635.1  SHC-transforming protein 1 isoform X1

      UniProtKB/TrEMBL
      G7MDV1
      Conserved Domains (2) summary
      cd09925
      Location:480 → 583
      SH2_SHC; Src homology 2 (SH2) domain found in SH2 adaptor protein C (SHC)
      cd01209
      Location:146 → 317
      PTB_Shc; Shc-like phosphotyrosine-binding (PTB) domain
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials