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    SRP54 signal recognition particle 54 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 694360, updated on 17-Aug-2024

    Summary

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    Official Symbol
    SRP54provided by VGNC
    Official Full Name
    signal recognition particle 54provided by VGNC
    Primary source
    VGNC:VGNC:82247
    Locus tag
    EGK_18109
    See related
    Ensembl:ENSMMUG00000015073
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human all
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    Genomic context

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    See SRP54 in Genome Data Viewer
    Location:
    chromosome: 7
    Exon count:
    17
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 7 NC_041760.1 (97060932..97107263)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 7 NC_027899.1 (96395663..96442622)

    Chromosome 7 - NC_041760.1Genomic Context describing neighboring genes Neighboring gene bromodomain adjacent to zinc finger domain 1A Neighboring gene U7 small nuclear RNA Neighboring gene immunoglobulin-binding protein 1 pseudogene Neighboring gene family with sequence similarity 177 member A1 Neighboring gene protein phosphatase 2 regulatory subunit B''gamma Neighboring gene protein only RNase P catalytic subunit

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequencing and comparison of two nonhuman primate animal models, the cynomolgus and Chinese rhesus macaques. Yan G, et al. Nat Biotechnol, 2011 Oct 16. PMID 22002653
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables 7S RNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ATP hydrolysis activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables GTP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables GTPase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables endoplasmic reticulum signal peptide binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in SRP-dependent cotranslational protein targeting to membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in SRP-dependent cotranslational protein targeting to membrane, translocation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytosol IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of signal recognition particle, endoplasmic reticulum targeting IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    signal recognition particle subunit SRP54; signal recognition particle 54 kDa protein
    NP_001247781.1
    XP_014999016.1
    XP_014999017.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001260852.2 → NP_001247781.1  signal recognition particle subunit SRP54

      See identical proteins and their annotated locations for NP_001247781.1

      Status: PROVISIONAL

      Source sequence(s)
      JV048031
      UniProtKB/TrEMBL
      A0A1D5Q506, A0A1D5QF89, A0A8J8YIP5, F6WVU7, G7MXG1
      Related
      ENSMMUP00000046708.2, ENSMMUT00000060156.2
      Conserved Domains (1) summary
      TIGR01425
      Location:2 → 430
      SRP54_euk; signal recognition particle protein SRP54

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041760.1 Reference Mmul_10 Primary Assembly

      Range
      97060932..97107263
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015143531.2 → XP_014999017.1  signal recognition particle 54 kDa protein isoform X1

      UniProtKB/TrEMBL
      A0A1D5Q506, A0A1D5QF89, A0A8J8YIP5, F6WVU7, G7MXG1
      Related
      ENSMMUP00000043121.2, ENSMMUT00000068887.2
      Conserved Domains (1) summary
      TIGR01425
      Location:2 → 430
      SRP54_euk; signal recognition particle protein SRP54

    2. XM_015143530.2 → XP_014999016.1  signal recognition particle 54 kDa protein isoform X1

      UniProtKB/TrEMBL
      A0A1D5Q506, A0A1D5QF89, A0A8J8YIP5, F6WVU7, G7MXG1
      Conserved Domains (1) summary
      TIGR01425
      Location:2 → 430
      SRP54_euk; signal recognition particle protein SRP54
    Nucleotide Protein
    Heading Accession and Version

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