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    RBM48 RNA binding motif protein 48 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 703152, updated on 17-Aug-2024

    Summary

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    Official Symbol
    RBM48provided by VGNC
    Official Full Name
    RNA binding motif protein 48provided by VGNC
    Primary source
    VGNC:VGNC:76518
    Locus tag
    EGK_13942
    See related
    Ensembl:ENSMMUG00000015534
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See RBM48 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 3 NC_041756.1 (113605225..113614818, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 3 NC_027895.1 (117813680..117823309)

    Chromosome 3 - NC_041756.1Genomic Context describing neighboring genes Neighboring gene family with sequence similarity 133 member B Neighboring gene EF-hand calcium-binding domain-containing protein 1-like Neighboring gene uncharacterized LOC114676988 Neighboring gene peroxisomal biogenesis factor 1 Neighboring gene GATA zinc finger domain containing 1 Neighboring gene endogenous retrovirus group W member 1, envelope

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables nucleic acid binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    RNA-binding protein 48

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041756.1 Reference Mmul_10 Primary Assembly

      Range
      113605225..113614818 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015134238.2 → XP_014989724.1  RNA-binding protein 48 isoform X1

      UniProtKB/TrEMBL
      A0A663DAP6, A0A8J8Y701, F6RN96, F6RP00, G7MLW5, H9G0J6
      Related
      ENSMMUP00000020381.4, ENSMMUT00000021787.4
      Conserved Domains (1) summary
      cd12442
      Location:36 → 135
      RRM_RBM48; RNA recognition motif in RNA-binding protein 48 (RBM48) and similar proteins

    2. XM_015134239.2 → XP_014989725.1  RNA-binding protein 48 isoform X2

      UniProtKB/TrEMBL
      H9G0J6
      Conserved Domains (1) summary
      cl17169
      Location:1 → 77
      RRM_SF; RNA recognition motif (RRM) superfamily
    Nucleotide Protein
    Heading Accession and Version

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