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    NEDD1 NEDD1 gamma-tubulin ring complex targeting factor [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 713673, updated on 17-Aug-2024

    Summary

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    Official Symbol
    NEDD1provided by VGNC
    Official Full Name
    NEDD1 gamma-tubulin ring complex targeting factorprovided by VGNC
    Primary source
    VGNC:VGNC:75301
    See related
    Ensembl:ENSMMUG00000004093
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See NEDD1 in Genome Data Viewer
    Location:
    chromosome: 11
    Exon count:
    18
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 11 NC_041764.1 (96713611..96759762)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 11 NC_027903.1 (96755014..96801228)

    Chromosome 11 - NC_041764.1Genomic Context describing neighboring genes Neighboring gene cilia and flagella associated protein 54 Neighboring gene elongation factor 1-alpha 1-like Neighboring gene NADH dehydrogenase [ubiquinone] flavoprotein 2, mitochondrial pseudogene Neighboring gene uncharacterized LOC107000989 Neighboring gene microRNA mir-1251

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables gamma-tubulin binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in microtubule nucleation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in mitotic cell cycle IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in centriole IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in ciliary basal body IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in pericentriolar material IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in spindle pole IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    protein NEDD1
    Names
    neural precursor cell expressed, developmentally down-regulated 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041764.1 Reference Mmul_10 Primary Assembly

      Range
      96713611..96759762
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015152494.2 → XP_015007980.1  protein NEDD1 isoform X1

      UniProtKB/TrEMBL
      F6TTW3, F6ZCS2
      Related
      ENSMMUP00000005469.4, ENSMMUT00000005807.4
      Conserved Domains (3) summary
      COG2319
      Location:3 → 278
      WD40; WD40 repeat [General function prediction only]
      cd00200
      Location:24 → 299
      WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
      sd00039
      Location:81 → 117
      7WD40; WD40 repeat [structural motif]

    2. XM_028829793.1 → XP_028685626.1  protein NEDD1 isoform X3

      UniProtKB/TrEMBL
      F6TTW3
      Conserved Domains (2) summary
      cd00200
      Location:2 → 210
      WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
      sd00039
      Location:34 → 71
      7WD40; WD40 repeat [structural motif]

    3. XM_015152491.2 → XP_015007977.1  protein NEDD1 isoform X1

      UniProtKB/TrEMBL
      F6TTW3, F6ZCS2
      Conserved Domains (3) summary
      COG2319
      Location:3 → 278
      WD40; WD40 repeat [General function prediction only]
      cd00200
      Location:24 → 299
      WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
      sd00039
      Location:81 → 117
      7WD40; WD40 repeat [structural motif]

    4. XM_015152495.2 → XP_015007981.1  protein NEDD1 isoform X1

      UniProtKB/TrEMBL
      F6TTW3, F6ZCS2
      Conserved Domains (3) summary
      COG2319
      Location:3 → 278
      WD40; WD40 repeat [General function prediction only]
      cd00200
      Location:24 → 299
      WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
      sd00039
      Location:81 → 117
      7WD40; WD40 repeat [structural motif]

    5. XM_015152493.2 → XP_015007979.1  protein NEDD1 isoform X2

      UniProtKB/TrEMBL
      F6TTW3
      Conserved Domains (3) summary
      COG2319
      Location:20 → 240
      WD40; WD40 repeat [General function prediction only]
      cd00200
      Location:12 → 230
      WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
      sd00039
      Location:12 → 48
      7WD40; WD40 repeat [structural motif]
    Nucleotide Protein
    Heading Accession and Version

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