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    PALMD palmdelphin [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 710731, updated on 17-Aug-2024

    Summary

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    Official Symbol
    PALMDprovided by VGNC
    Official Full Name
    palmdelphinprovided by VGNC
    Primary source
    VGNC:VGNC:75613
    See related
    Ensembl:ENSMMUG00000016335
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See PALMD in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 1 NC_041754.1 (124452568..124506215, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 1 NC_027893.1 (100508559..100557230)

    Chromosome 1 - NC_041754.1Genomic Context describing neighboring genes Neighboring gene U4 spliceosomal RNA Neighboring gene ferric chelate reductase 1 Neighboring gene U6 spliceosomal RNA Neighboring gene uncharacterized LOC106999827

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in regulation of cell shape IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    palmdelphin

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041754.1 Reference Mmul_10 Primary Assembly

      Range
      124452568..124506215 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028831260.1 → XP_028687093.1  palmdelphin isoform X2

      UniProtKB/TrEMBL
      I0FSV7
      Conserved Domains (1) summary
      pfam03285
      Location:17 → 447
      Paralemmin

    2. XM_001105954.4 → XP_001105954.2  palmdelphin isoform X1

      UniProtKB/TrEMBL
      A0A5S6R858, A0A8J8XH44, F7GRL6, G7MI49, I0FSV7
      Related
      ENSMMUP00000021456.3, ENSMMUT00000022941.4
      Conserved Domains (1) summary
      pfam03285
      Location:78 → 447
      Paralemmin

    3. XM_028831263.1 → XP_028687096.1  palmdelphin isoform X3

      UniProtKB/TrEMBL
      I0FSV7
      Conserved Domains (1) summary
      pfam03285
      Location:15 → 384
      Paralemmin
    Nucleotide Protein
    Heading Accession and Version

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