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    SLC24A1 solute carrier family 24 member 1 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 713970, updated on 17-Aug-2024

    Summary

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    Official Symbol
    SLC24A1provided by VGNC
    Official Full Name
    solute carrier family 24 member 1provided by VGNC
    Primary source
    VGNC:VGNC:77424
    See related
    Ensembl:ENSMMUG00000022059
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See SLC24A1 in Genome Data Viewer
    Location:
    chromosome: 7
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 7 NC_041760.1 (42164548..42208542)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 7 NC_027899.1 (42303765..42350234)

    Chromosome 7 - NC_041760.1Genomic Context describing neighboring genes Neighboring gene 3-hydroxyacyl-CoA dehydratase 3 Neighboring gene small nucleolar RNA U13 Neighboring gene integrator complex subunit 14 Neighboring gene DENN domain containing 4A Neighboring gene small nucleolar RNA U13 Neighboring gene 60S ribosomal protein L12 pseudogene

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables calcium channel activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables calcium, potassium:sodium antiporter activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in calcium ion transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in intracellular calcium ion homeostasis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in long-term synaptic depression IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in long-term synaptic potentiation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in visual perception IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    sodium/potassium/calcium exchanger 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041760.1 Reference Mmul_10 Primary Assembly

      Range
      42164548..42208542
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015142512.2 → XP_014997998.2  sodium/potassium/calcium exchanger 1 isoform X1

      UniProtKB/TrEMBL
      F7HR20, G7MXV1
      Related
      ENSMMUP00000029051.4, ENSMMUT00000031035.4
      Conserved Domains (1) summary
      TIGR00927
      Location:1 → 1093
      2A1904; K+-dependent Na+/Ca+ exchanger

    2. XM_015142513.2 → XP_014997999.2  sodium/potassium/calcium exchanger 1 isoform X3

      UniProtKB/TrEMBL
      G7MXV1
      Conserved Domains (1) summary
      TIGR00927
      Location:1 → 1063
      2A1904; K+-dependent Na+/Ca+ exchanger

    3. XM_028851051.1 → XP_028706884.1  sodium/potassium/calcium exchanger 1 isoform X2

      UniProtKB/TrEMBL
      G7MXV1
      Conserved Domains (1) summary
      TIGR00927
      Location:1 → 1075
      2A1904; K+-dependent Na+/Ca+ exchanger
    Nucleotide Protein
    Heading Accession and Version

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