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    AFG2A AFG2 AAA ATPase homolog A [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 708640, updated on 17-Aug-2024

    Summary

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    Official Symbol
    AFG2Aprovided by VGNC
    Official Full Name
    AFG2 AAA ATPase homolog Aprovided by VGNC
    Primary source
    VGNC:VGNC:77952
    Locus tag
    EGK_16072
    See related
    Ensembl:ENSMMUG00000007422
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Also known as
    SPATA5
    Orthologs
    human mouse all
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    Genomic context

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    See AFG2A in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    19
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 5 NC_041758.1 (120762400..121132542)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 5 NC_027897.1 (121915470..122334541)

    Chromosome 5 - NC_041758.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC100430934 Neighboring gene Bardet-Biedl syndrome 12 Neighboring gene fibroblast growth factor 2 Neighboring gene nudix hydrolase 6 Neighboring gene coilin pseudogene Neighboring gene sprouty RTK signaling antagonist 1 Neighboring gene 40S ribosomal protein S17 pseudogene

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequencing and comparison of two nonhuman primate animal models, the cynomolgus and Chinese rhesus macaques. Yan G, et al. Nat Biotechnol, 2011 Oct 16. PMID 22002653
    2. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ATP hydrolysis activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    spermatogenesis-associated protein 5; ATPase family protein 2 homolog
    Names
    spermatogenesis associated 5

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041758.1 Reference Mmul_10 Primary Assembly

      Range
      120762400..121132542
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001104133.4 → XP_001104133.1  ATPase family protein 2 homolog isoform X1

      See identical proteins and their annotated locations for XP_001104133.1

      UniProtKB/TrEMBL
      A0A5F7ZFI8, A0A5F8A4Y6, A0A8J8YA76, F6SX15
      Related
      ENSMMUP00000073009.1, ENSMMUT00000087260.1
      Conserved Domains (3) summary
      COG0464
      Location:369 → 881
      SpoVK; AAA+-type ATPase, SpoVK/Ycf46/Vps4 family [Cell wall/membrane/envelope biogenesis, Cell cycle control, cell division, chromosome partitioning, Signal transduction mechanisms]
      pfam00004
      Location:663 → 795
      AAA; ATPase family associated with various cellular activities (AAA)
      cl21693
      Location:65 → 133
      CDC48_N; Cell division protein 48 (CDC48), N-terminal domain

    2. XM_015139177.2 → XP_014994663.1  ATPase family protein 2 homolog isoform X2

      UniProtKB/TrEMBL
      A0A5F7ZFI8
      Related
      ENSMMUP00000063946.1, ENSMMUT00000096477.1
      Conserved Domains (3) summary
      COG0464
      Location:368 → 880
      SpoVK; AAA+-type ATPase, SpoVK/Ycf46/Vps4 family [Cell wall/membrane/envelope biogenesis, Cell cycle control, cell division, chromosome partitioning, Signal transduction mechanisms]
      pfam00004
      Location:662 → 794
      AAA; ATPase family associated with various cellular activities (AAA)
      cl21693
      Location:64 → 132
      CDC48_N; Cell division protein 48 (CDC48), N-terminal domain

    3. XM_028848758.1 → XP_028704591.1  ATPase family protein 2 homolog isoform X3

      UniProtKB/TrEMBL
      F6SX50
      Related
      ENSMMUP00000009741.4, ENSMMUT00000010379.4
      Conserved Domains (2) summary
      TIGR01243
      Location:322 → 778
      CDC48; AAA family ATPase, CDC48 subfamily
      cl21693
      Location:65 → 133
      CDC48_N; Cell division protein 48 (CDC48), N-terminal domain

    4. XM_028848759.1 → XP_028704592.1  ATPase family protein 2 homolog isoform X4

      UniProtKB/TrEMBL
      F6SX50
      Conserved Domains (2) summary
      TIGR01243
      Location:322 → 742
      CDC48; AAA family ATPase, CDC48 subfamily
      cl21693
      Location:65 → 133
      CDC48_N; Cell division protein 48 (CDC48), N-terminal domain

    5. XM_015139178.2 → XP_014994664.1  ATPase family protein 2 homolog isoform X5

      UniProtKB/TrEMBL
      A0A5F7ZFI8
      Conserved Domains (2) summary
      COG0464
      Location:217 → 729
      SpoVK; AAA+-type ATPase, SpoVK/Ycf46/Vps4 family [Cell wall/membrane/envelope biogenesis, Cell cycle control, cell division, chromosome partitioning, Signal transduction mechanisms]
      pfam00004
      Location:511 → 643
      AAA; ATPase family associated with various cellular activities (AAA)
    Nucleotide Protein
    Heading Accession and Version

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