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    HPF1 histone PARylation factor 1 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 694607, updated on 17-Aug-2024

    Summary

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    Official Symbol
    HPF1provided by VGNC
    Official Full Name
    histone PARylation factor 1provided by VGNC
    Primary source
    VGNC:VGNC:100235
    See related
    Ensembl:ENSMMUG00000010232
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Also known as
    C5H4orf27
    Orthologs
    human mouse all
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    Genomic context

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    See HPF1 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 5 NC_041758.1 (167034328..167064911, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 5 NC_027897.1 (169950603..169980597, complement)

    Chromosome 5 - NC_041758.1Genomic Context describing neighboring genes Neighboring gene NIMA related kinase 1 Neighboring gene chloride voltage-gated channel 3 Neighboring gene prostaglandin E synthase 3 pseudogene Neighboring gene uncharacterized LOC106998572 Neighboring gene uncharacterized LOC114678428

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables histone binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables poly-ADP-D-ribose binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in DNA damage response IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of protein ADP-ribosylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    UPF0609 protein C4orf27 homolog

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001260760.2 → NP_001247689.1  UPF0609 protein C4orf27 homolog

      See identical proteins and their annotated locations for NP_001247689.1

      Status: PROVISIONAL

      Source sequence(s)
      JV045476
      UniProtKB/TrEMBL
      F6S3H7, G7MSA9
      Related
      ENSMMUP00000013398.2, ENSMMUT00000014304.4
      Conserved Domains (1) summary
      pfam10228
      Location:79 → 328
      DUF2228; uncharacterized conserved protein (DUF2228)

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041758.1 Reference Mmul_10 Primary Assembly

      Range
      167034328..167064911 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015139454.2 → XP_014994940.1  UPF0609 protein C4orf27 homolog isoform X1

      UniProtKB/TrEMBL
      A0A1D5RAN6, G7MSA9
      Related
      ENSMMUP00000057377.1, ENSMMUT00000053488.2
      Conserved Domains (1) summary
      pfam10228
      Location:79 → 304
      DUF2228; uncharacterized conserved protein (DUF2228)
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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