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    SHOX2 SHOX homeobox 2 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 704327, updated on 17-Aug-2024

    Summary

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    Official Symbol
    SHOX2provided by VGNC
    Official Full Name
    SHOX homeobox 2provided by VGNC
    Primary source
    VGNC:VGNC:77212
    See related
    Ensembl:ENSMMUG00000019030
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See SHOX2 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 2 NC_041755.1 (60380846..60391319, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 2 NC_027894.1 (145281780..145291908, complement)

    Chromosome 2 - NC_041755.1Genomic Context describing neighboring genes Neighboring gene solute carrier family 66 member 1 like Neighboring gene peptidyl-prolyl cis-trans isomerase A pseudogene Neighboring gene ATP synthase subunit f, mitochondrial pseudogene Neighboring gene arginine and serine rich coiled-coil 1 Neighboring gene 60S ribosomal protein L15 pseudogene

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables sequence-specific double-stranded DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    short stature homeobox protein 2
    Names
    short stature homeobox 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041755.1 Reference Mmul_10 Primary Assembly

      Range
      60380846..60391319 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001102416.4 → XP_001102416.1  short stature homeobox protein 2

      See identical proteins and their annotated locations for XP_001102416.1

      UniProtKB/TrEMBL
      G7MJF0
      Related
      ENSMMUP00000006564.4, ENSMMUT00000006982.4
      Conserved Domains (2) summary
      pfam00046
      Location:143 → 196
      Homeobox; Homeobox domain
      pfam03826
      Location:311 → 327
      OAR; OAR domain
    Nucleotide Protein
    Heading Accession and Version

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