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    SLC50A1 solute carrier family 50 member 1 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 717424, updated on 17-Aug-2024

    Summary

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    Official Symbol
    SLC50A1provided by VGNC
    Official Full Name
    solute carrier family 50 member 1provided by VGNC
    Primary source
    VGNC:VGNC:77799
    Locus tag
    EGK_01377
    See related
    Ensembl:ENSMMUG00000013219
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Also known as
    RAG1AP1
    Orthologs
    human mouse all
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    Genomic context

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    See SLC50A1 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 1 NC_041754.1 (95890792..95894247, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 1 NC_027893.1 (129832574..129836044)

    Chromosome 1 - NC_041754.1Genomic Context describing neighboring genes Neighboring gene U7 small nuclear RNA Neighboring gene dolichyl-phosphate mannosyltransferase subunit 3, regulatory Neighboring gene ephrin A1 Neighboring gene uncharacterized LOC114670503 Neighboring gene ephrin A3

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequencing and comparison of two nonhuman primate animal models, the cynomolgus and Chinese rhesus macaques. Yan G, et al. Nat Biotechnol, 2011 Oct 16. PMID 22002653
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables sugar transmembrane transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in carbohydrate transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    sugar transporter SWEET1
    Names
    recombination activating gene 1 activating protein 1
    solute carrier family 50 (sugar transporter), member 1
    stromal cell protein

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041754.1 Reference Mmul_10 Primary Assembly

      Range
      95890792..95894247 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015111169.2 → XP_014966655.1  sugar transporter SWEET1 isoform X6

      UniProtKB/TrEMBL
      F6TTJ4
      Conserved Domains (1) summary
      pfam03083
      Location:62 → 148
      MtN3_slv; Sugar efflux transporter for intercellular exchange

    2. XM_015111147.2 → XP_014966633.1  sugar transporter SWEET1 isoform X3

      UniProtKB/TrEMBL
      H9ERI9
      Conserved Domains (2) summary
      pfam03083
      Location:95 → 181
      MtN3_slv; Sugar efflux transporter for intercellular exchange
      cl21610
      Location:1 → 63
      PQ-loop; PQ loop repeat

    3. XM_015111155.2 → XP_014966641.1  sugar transporter SWEET1 isoform X3

      UniProtKB/TrEMBL
      H9ERI9
      Conserved Domains (2) summary
      pfam03083
      Location:95 → 181
      MtN3_slv; Sugar efflux transporter for intercellular exchange
      cl21610
      Location:1 → 63
      PQ-loop; PQ loop repeat

    4. XM_001115244.4 → XP_001115244.1  sugar transporter SWEET1 isoform X1

      See identical proteins and their annotated locations for XP_001115244.1

      UniProtKB/TrEMBL
      A0A5S6RC53, A0A8J8XLQ7, F6X7V4, G7MDW1, H9ERI9
      Related
      ENSMMUP00000017366.4, ENSMMUT00000018542.4
      Conserved Domains (1) summary
      pfam03083
      Location:127 → 213
      MtN3_slv; Sugar efflux transporter for intercellular exchange

    5. XM_001115177.4 → XP_001115177.1  sugar transporter SWEET1 isoform X4

      See identical proteins and their annotated locations for XP_001115177.1

      UniProtKB/TrEMBL
      F6TTJ4, H9EUV1
      Related
      ENSMMUP00000038885.3, ENSMMUT00000045844.3
      Conserved Domains (2) summary
      pfam03083
      Location:9 → 95
      MtN3_slv; Sugar efflux transporter for intercellular exchange
      cl21610
      Location:67 → 159
      PQ-loop; PQ loop repeat

    6. XM_028828400.1 → XP_028684233.1  sugar transporter SWEET1 isoform X2

      UniProtKB/TrEMBL
      H9ERI9
      Conserved Domains (1) summary
      pfam03083
      Location:9 → 95
      MtN3_slv; Sugar efflux transporter for intercellular exchange

    7. XM_015111163.2 → XP_014966649.1  sugar transporter SWEET1 isoform X5

      Conserved Domains (2) summary
      pfam03083
      Location:120 → 206
      MtN3_slv; Sugar efflux transporter for intercellular exchange
      cl21610
      Location:45 → 88
      PQ-loop; PQ loop repeat
    Nucleotide Protein
    Heading Accession and Version

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