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    CASKIN1 CASK interacting protein 1 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 695482, updated on 17-Aug-2024

    Summary

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    Official Symbol
    CASKIN1provided by VGNC
    Official Full Name
    CASK interacting protein 1provided by VGNC
    Primary source
    VGNC:VGNC:70593
    See related
    Ensembl:ENSMMUG00000019226
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Also known as
    caskin-1
    Orthologs
    human mouse all
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    Genomic context

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    See CASKIN1 in Genome Data Viewer
    Location:
    chromosome: 20
    Exon count:
    21
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 20 NC_041773.1 (2209361..2228754, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 20 NC_027912.1 (2196817..2209819, complement)

    Chromosome 20 - NC_041773.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC106994912 Neighboring gene small nucleolar RNA SNORD60 Neighboring gene TNF receptor associated factor 7 Neighboring gene MTOR associated protein, LST8 homolog Neighboring gene BRICHOS domain containing 5 Neighboring gene phosphoglycolate phosphatase

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    caskin-1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041773.1 Reference Mmul_10 Primary Assembly

      Range
      2209361..2228754 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028841234.1 → XP_028697067.1  caskin-1 isoform X2

      UniProtKB/TrEMBL
      F6QHA2, H9EZY2
      Related
      ENSMMUP00000025272.4, ENSMMUT00000027013.4
      Conserved Domains (11) summary
      cd09497
      Location:471 → 536
      SAM_caskin1,2_repeat1; SAM domain of caskin protein repeat 1
      cd09498
      Location:537 → 607
      SAM_caskin1,2_repeat2; SAM domain of caskin protein repeat 2
      cd12062
      Location:284 → 345
      SH3_Caskin1; Src Homology 3 domain of CASK interacting protein 1
      PHA03095
      Location:41 → 258
      PHA03095; ankyrin-like protein; Provisional
      PHA03307
      Location:717 → 1118
      PHA03307; transcriptional regulator ICP4; Provisional
      sd00045
      Location:114 → 145
      ANK; ANK repeat [structural motif]
      pfam13637
      Location:7 → 69
      Ank_4; Ankyrin repeats (many copies)
      pfam16600
      Location:373 → 421
      Caskin1-CID; Caskin1 CASK-interaction domain
      pfam16632
      Location:1367 → 1428
      Caskin-tail; C-terminal region of Caskin
      pfam16907
      Location:876 → 947
      Caskin-Pro-rich; Proline rich region of Caskin proteins
      pfam12796
      Location:119 → 218
      Ank_2; Ankyrin repeats (3 copies)

    2. XM_028841235.1 → XP_028697068.1  caskin-1 isoform X3

      UniProtKB/TrEMBL
      H9EZY2
      Conserved Domains (10) summary
      cd09498
      Location:505 → 567
      SAM_caskin1,2_repeat2; SAM domain of caskin protein repeat 2
      cd12062
      Location:315 → 376
      SH3_Caskin1; Src Homology 3 domain of CASK interacting protein 1
      PHA03095
      Location:41 → 258
      PHA03095; ankyrin-like protein; Provisional
      PHA03307
      Location:677 → 1078
      PHA03307; transcriptional regulator ICP4; Provisional
      sd00045
      Location:114 → 145
      ANK; ANK repeat [structural motif]
      pfam13637
      Location:7 → 69
      Ank_4; Ankyrin repeats (many copies)
      pfam16600
      Location:404 → 452
      Caskin1-CID; Caskin1 CASK-interaction domain
      pfam16632
      Location:1327 → 1388
      Caskin-tail; C-terminal region of Caskin
      pfam16907
      Location:836 → 907
      Caskin-Pro-rich; Proline rich region of Caskin proteins
      pfam12796
      Location:119 → 218
      Ank_2; Ankyrin repeats (3 copies)

    3. XM_028841233.1 → XP_028697066.1  caskin-1 isoform X1

      UniProtKB/TrEMBL
      H9EZY2
      Conserved Domains (11) summary
      cd09497
      Location:502 → 567
      SAM_caskin1,2_repeat1; SAM domain of caskin protein repeat 1
      cd09498
      Location:568 → 638
      SAM_caskin1,2_repeat2; SAM domain of caskin protein repeat 2
      cd12062
      Location:315 → 376
      SH3_Caskin1; Src Homology 3 domain of CASK interacting protein 1
      PHA03095
      Location:41 → 258
      PHA03095; ankyrin-like protein; Provisional
      PHA03307
      Location:748 → 1149
      PHA03307; transcriptional regulator ICP4; Provisional
      sd00045
      Location:114 → 145
      ANK; ANK repeat [structural motif]
      pfam13637
      Location:7 → 69
      Ank_4; Ankyrin repeats (many copies)
      pfam16600
      Location:404 → 452
      Caskin1-CID; Caskin1 CASK-interaction domain
      pfam16632
      Location:1398 → 1459
      Caskin-tail; C-terminal region of Caskin
      pfam16907
      Location:907 → 978
      Caskin-Pro-rich; Proline rich region of Caskin proteins
      pfam12796
      Location:119 → 218
      Ank_2; Ankyrin repeats (3 copies)

    4. XM_028841237.1 → XP_028697070.1  caskin-1 isoform X5

      UniProtKB/TrEMBL
      A0A5F7ZRF5, H9EZY2
      Related
      ENSMMUP00000068209.1, ENSMMUT00000087982.1
      Conserved Domains (10) summary
      cd09498
      Location:474 → 536
      SAM_caskin1,2_repeat2; SAM domain of caskin protein repeat 2
      cd12062
      Location:284 → 345
      SH3_Caskin1; Src Homology 3 domain of CASK interacting protein 1
      PHA03095
      Location:41 → 258
      PHA03095; ankyrin-like protein; Provisional
      PHA03307
      Location:646 → 1047
      PHA03307; transcriptional regulator ICP4; Provisional
      sd00045
      Location:114 → 145
      ANK; ANK repeat [structural motif]
      pfam13637
      Location:7 → 69
      Ank_4; Ankyrin repeats (many copies)
      pfam16600
      Location:373 → 421
      Caskin1-CID; Caskin1 CASK-interaction domain
      pfam16632
      Location:1296 → 1357
      Caskin-tail; C-terminal region of Caskin
      pfam16907
      Location:805 → 876
      Caskin-Pro-rich; Proline rich region of Caskin proteins
      pfam12796
      Location:119 → 218
      Ank_2; Ankyrin repeats (3 copies)

    5. XM_028841236.1 → XP_028697069.1  caskin-1 isoform X4

      UniProtKB/TrEMBL
      H9EZY2
      Conserved Domains (9) summary
      cd09497
      Location:420 → 485
      SAM_caskin1,2_repeat1; SAM domain of caskin protein repeat 1
      cd09498
      Location:486 → 556
      SAM_caskin1,2_repeat2; SAM domain of caskin protein repeat 2
      cd12062
      Location:233 → 294
      SH3_Caskin1; Src Homology 3 domain of CASK interacting protein 1
      PHA03307
      Location:666 → 1067
      PHA03307; transcriptional regulator ICP4; Provisional
      sd00045
      Location:32 → 63
      ANK; ANK repeat [structural motif]
      pfam16600
      Location:322 → 370
      Caskin1-CID; Caskin1 CASK-interaction domain
      pfam16632
      Location:1316 → 1377
      Caskin-tail; C-terminal region of Caskin
      pfam16907
      Location:825 → 896
      Caskin-Pro-rich; Proline rich region of Caskin proteins
      pfam12796
      Location:37 → 136
      Ank_2; Ankyrin repeats (3 copies)
    Nucleotide Protein
    Heading Accession and Version

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