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    PUDP pseudouridine 5'-phosphatase [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 707930, updated on 5-Mar-2024

    Summary

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    Gene symbol
    PUDP
    Gene description
    pseudouridine 5'-phosphatase
    See related
    Ensembl:ENSMMUG00000017377
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Also known as
    HDHD1; HDHD1A
    Orthologs
    human mouse all
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    Genomic context

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    See PUDP in Genome Data Viewer
    Location:
    chromosome: X
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) X NC_041774.1 (6518505..6689158, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) X NC_027913.1 (6010537..6182895, complement)

    Chromosome X - NC_041774.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC114674915 Neighboring gene variable charge X-linked-like Neighboring gene ubiquitin-40S ribosomal protein S27a Neighboring gene steroid sulfatase Neighboring gene uncharacterized LOC114674856 Neighboring gene patatin like phospholipase domain containing 4 Neighboring gene variable charge X-linked-like pseudogene

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables phosphatase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    pseudouridine-5'-phosphatase
    Names
    haloacid dehalogenase-like hydrolase domain-containing protein 1A-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041774.1 Reference Mmul_10 Primary Assembly

      Range
      6518505..6689158 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015126903.2 → XP_014982389.1  pseudouridine-5'-phosphatase isoform X2

      Conserved Domains (1) summary
      cl21460
      Location:9 → 184
      HAD_like; Haloacid Dehalogenase-like Hydrolases

    2. XM_001089095.4 → XP_001089095.1  pseudouridine-5'-phosphatase isoform X1

      UniProtKB/TrEMBL
      A0A1D5R5A1, G7NKM5
      Related
      ENSMMUP00000055488.2, ENSMMUT00000061230.2
      Conserved Domains (1) summary
      cd07529
      Location:9 → 197
      HAD_AtGPP-like; subfamily of beta-phosphoglucomutase-like family, similar to Arabidopsis thaliana Gpp1 and Gpp2

    3. XM_028842250.1 → XP_028698083.1  pseudouridine-5'-phosphatase isoform X3

      Conserved Domains (1) summary
      cl21460
      Location:9 → 168
      HAD_like; Haloacid Dehalogenase-like Hydrolases
    Nucleotide Protein
    Heading Accession and Version

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