U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    SEC14L1 SEC14 like lipid binding 1 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 708394, updated on 17-Aug-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    SEC14L1provided by VGNC
    Official Full Name
    SEC14 like lipid binding 1provided by VGNC
    Primary source
    VGNC:VGNC:99226
    See related
    Ensembl:ENSMMUG00000022994
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See SEC14L1 in Genome Data Viewer
    Location:
    chromosome: 16
    Exon count:
    18
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 16 NC_041769.1 (73515372..73591897)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 16 NC_027908.1 (70916961..70998749)

    Chromosome 16 - NC_041769.1Genomic Context describing neighboring genes Neighboring gene small Cajal body-specific RNA 16 Neighboring gene uncharacterized LOC114673193 Neighboring gene U4 spliceosomal RNA Neighboring gene septin 9 Neighboring gene uncharacterized LOC100427734 Neighboring gene proline-rich protein 2-like

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables RIG-I binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in negative regulation of RIG-I signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in cytosol IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    SEC14-like protein 1
    Names
    SEC14-like 1

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001258116.1 → NP_001245045.1  SEC14-like protein 1

      See identical proteins and their annotated locations for NP_001245045.1

      Status: PROVISIONAL

      Source sequence(s)
      JU472452
      UniProtKB/TrEMBL
      A0A1D5QMA1, A0A663DDQ9, A0A8J8XNI3, G7NGZ2, I0FU48
      Related
      ENSMMUP00000049176.2, ENSMMUT00000078018.2
      Conserved Domains (3) summary
      smart01100
      Location:256 → 301
      CRAL_TRIO_N; CRAL/TRIO, N-terminal domain
      pfam00650
      Location:326 → 490
      CRAL_TRIO; CRAL/TRIO domain
      pfam04707
      Location:17 → 173
      PRELI; PRELI-like family

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041769.1 Reference Mmul_10 Primary Assembly

      Range
      73515372..73591897
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015120347.2 → XP_014975833.2  SEC14-like protein 1 isoform X1

      UniProtKB/TrEMBL
      A0A1D5QMA1, A0A663DDQ9, A0A8J8XNI3, F6U5Q0, G7NGZ2, H9FYB5, I0FU49
      Related
      ENSMMUP00000030276.4, ENSMMUT00000032358.4
      Conserved Domains (3) summary
      smart01100
      Location:256 → 301
      CRAL_TRIO_N; CRAL/TRIO, N-terminal domain
      pfam00650
      Location:326 → 490
      CRAL_TRIO; CRAL/TRIO domain
      pfam04707
      Location:17 → 173
      PRELI; PRELI-like family
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.