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    STRBP spermatid perinuclear RNA binding protein [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 695402, updated on 17-Aug-2024

    Summary

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    Official Symbol
    STRBPprovided by VGNC
    Official Full Name
    spermatid perinuclear RNA binding proteinprovided by VGNC
    Primary source
    VGNC:VGNC:78136
    See related
    Ensembl:ENSMMUG00000022919
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See STRBP in Genome Data Viewer
    Location:
    chromosome: 15
    Exon count:
    22
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 15 NC_041768.1 (17415403..17566299)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 15 NC_027907.1 (15908373..15967780)

    Chromosome 15 - NC_041768.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC114672730 Neighboring gene uncharacterized LOC114672731 Neighboring gene crumbs cell polarity complex component 2 Neighboring gene uncharacterized LOC106993613 Neighboring gene microRNA mir-600 Neighboring gene RAB GTPase activating protein 1 Neighboring gene G protein-coupled receptor 21 Neighboring gene uncharacterized LOC114672732

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables double-stranded RNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables single-stranded RNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of precatalytic spliceosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    spermatid perinuclear RNA-binding protein

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001261080.1 → NP_001248009.1  spermatid perinuclear RNA-binding protein

      See identical proteins and their annotated locations for NP_001248009.1

      Status: PROVISIONAL

      Source sequence(s)
      JV045025
      UniProtKB/TrEMBL
      F7H6I5, G7NFU2
      Related
      ENSMMUP00000039855.2, ENSMMUT00000046825.3
      Conserved Domains (2) summary
      smart00572
      Location:81 → 334
      DZF; domain in DSRM or ZnF_C2H2 domain containing proteins
      smart00358
      Location:389 → 452
      DSRM; Double-stranded RNA binding motif

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041768.1 Reference Mmul_10 Primary Assembly

      Range
      17415403..17566299
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028834223.1 → XP_028690056.1  spermatid perinuclear RNA-binding protein isoform X2

      UniProtKB/TrEMBL
      A0A5F7ZQB3
      Conserved Domains (3) summary
      smart00572
      Location:67 → 320
      DZF; domain in DSRM or ZnF_C2H2 domain containing proteins
      smart00358
      Location:375 → 438
      DSRM; Double-stranded RNA binding motif
      pfam17228
      Location:593 → 650
      SGP; Sulphur globule protein

    2. XM_028834224.1 → XP_028690057.1  spermatid perinuclear RNA-binding protein isoform X3

      UniProtKB/TrEMBL
      F6W6A5, G7NFU2
      Related
      ENSMMUP00000030188.4, ENSMMUT00000032265.4
      Conserved Domains (2) summary
      smart00572
      Location:67 → 320
      DZF; domain in DSRM or ZnF_C2H2 domain containing proteins
      smart00358
      Location:375 → 438
      DSRM; Double-stranded RNA binding motif

    3. XM_028834222.1 → XP_028690055.1  spermatid perinuclear RNA-binding protein isoform X1

      UniProtKB/TrEMBL
      A0A5F7ZQB3
      Conserved Domains (3) summary
      smart00572
      Location:81 → 334
      DZF; domain in DSRM or ZnF_C2H2 domain containing proteins
      smart00358
      Location:389 → 452
      DSRM; Double-stranded RNA binding motif
      pfam17228
      Location:607 → 664
      SGP; Sulphur globule protein

    4. XM_028834225.1 → XP_028690058.1  spermatid perinuclear RNA-binding protein isoform X4

      UniProtKB/TrEMBL
      A0A5F7ZQB3, A0A5F8AI10
      Related
      ENSMMUP00000077037.1, ENSMMUT00000089281.1
      Conserved Domains (2) summary
      smart00572
      Location:81 → 334
      DZF; domain in DSRM or ZnF_C2H2 domain containing proteins
      smart00358
      Location:389 → 452
      DSRM; Double-stranded RNA binding motif

    5. XM_028834227.1 → XP_028690060.1  spermatid perinuclear RNA-binding protein isoform X6

      UniProtKB/TrEMBL
      A0A5F8AJW8
      Related
      ENSMMUP00000078136.1, ENSMMUT00000094686.1
      Conserved Domains (3) summary
      smart00358
      Location:289 → 352
      DSRM; Double-stranded RNA binding motif
      cl02675
      Location:81 → 234
      DZF; DZF domain
      pfam17228
      Location:507 → 564
      SGP; Sulphur globule protein

    6. XM_028834226.1 → XP_028690059.1  spermatid perinuclear RNA-binding protein isoform X5

      UniProtKB/TrEMBL
      A0A5F7ZQB3
      Related
      ENSMMUP00000067343.1, ENSMMUT00000104744.1
      Conserved Domains (2) summary
      smart00572
      Location:81 → 334
      DZF; domain in DSRM or ZnF_C2H2 domain containing proteins
      smart00358
      Location:389 → 452
      DSRM; Double-stranded RNA binding motif

    RNA

    1. XR_003722988.1 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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