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    TCHH trichohyalin [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 717358, updated on 17-Aug-2024

    Summary

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    Official Symbol
    TCHHprovided by VGNC
    Official Full Name
    trichohyalinprovided by VGNC
    Primary source
    VGNC:VGNC:106515
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See TCHH in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 1 NC_041754.1 (98932890..98942203)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 1 NC_027893.1 (126674565..126682830, complement)

    Chromosome 1 - NC_041754.1Genomic Context describing neighboring genes Neighboring gene repetin Neighboring gene pseudouridine-5'-phosphatase-like Neighboring gene trichohyalin like 1 Neighboring gene high mobility group protein B3 pseudogene

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables calcium ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables transition metal ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in intermediate filament organization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    LOW QUALITY PROTEIN: trichohyalin

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041754.1 Reference Mmul_10 Primary Assembly

      Range
      98932890..98942203
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028828852.1 → XP_028684685.1  LOW QUALITY PROTEIN: trichohyalin

      Conserved Domains (3) summary
      PTZ00121
      Location:1147 → 1791
      PTZ00121; MAEBL; Provisional
      cd00213
      Location:2 → 89
      S-100; S-100 domain, which represents the largest family within the superfamily of proteins carrying the Ca-binding EF-hand motif. Note that this S-100 hierarchy contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are ...
      pfam13868
      Location:1529 → 1815
      TPH; Trichohyalin-plectin-homology domain
    Nucleotide Protein
    Heading Accession and Version

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