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    TSPAN6 tetraspanin 6 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 703166, updated on 17-Aug-2024

    Summary

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    Official Symbol
    TSPAN6provided by VGNC
    Official Full Name
    tetraspanin 6provided by VGNC
    Primary source
    VGNC:VGNC:78565
    See related
    Ensembl:ENSMMUG00000008209
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See TSPAN6 in Genome Data Viewer
    Location:
    chromosome: X
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) X NC_041774.1 (97407415..97418436, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) X NC_027913.1 (94788298..94799305, complement)

    Chromosome X - NC_041774.1Genomic Context describing neighboring genes Neighboring gene protocadherin 19 Neighboring gene tenomodulin Neighboring gene sushi repeat containing protein X-linked 2 Neighboring gene synaptotagmin like 4 Neighboring gene thymosin beta-4 pseudogene

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    tetraspanin-6
    Names
    tetraspanin-6-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041774.1 Reference Mmul_10 Primary Assembly

      Range
      97407415..97418436 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015127798.2 → XP_014983284.2  tetraspanin-6 isoform X1

      UniProtKB/TrEMBL
      A0A1D5RFV0, G7NSF5
      Related
      ENSMMUP00000059194.2, ENSMMUT00000063970.2
      Conserved Domains (2) summary
      cd03161
      Location:112 → 209
      TM4SF2_6_like_LEL; Tetraspanin, extracellular domain or large extracellular loop (LEL), TM4SF2_6_like subfamily. Tetraspanins are trans-membrane proteins with 4 trans-membrane segments. Both the N- and C-termini lie on the intracellular side of the membrane. This alignment ...
      pfam00335
      Location:17 → 233
      Tetraspannin; Tetraspanin family

    2. XM_015127799.2 → XP_014983285.2  tetraspanin-6 isoform X2

      Conserved Domains (1) summary
      cd03161
      Location:24 → 121
      TM4SF2_6_like_LEL; Tetraspanin, extracellular domain or large extracellular loop (LEL), TM4SF2_6_like subfamily. Tetraspanins are trans-membrane proteins with 4 trans-membrane segments. Both the N- and C-termini lie on the intracellular side of the membrane. This alignment ...

    3. XM_028842253.1 → XP_028698086.1  tetraspanin-6 isoform X2

      Conserved Domains (1) summary
      cd03161
      Location:24 → 121
      TM4SF2_6_like_LEL; Tetraspanin, extracellular domain or large extracellular loop (LEL), TM4SF2_6_like subfamily. Tetraspanins are trans-membrane proteins with 4 trans-membrane segments. Both the N- and C-termini lie on the intracellular side of the membrane. This alignment ...
    Nucleotide Protein
    Heading Accession and Version

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