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    TLCD5 TLC domain containing 5 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 706163, updated on 17-Aug-2024

    Summary

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    Official Symbol
    TLCD5provided by VGNC
    Official Full Name
    TLC domain containing 5provided by VGNC
    Primary source
    VGNC:VGNC:78475
    Locus tag
    EGK_06999
    See related
    Ensembl:ENSMMUG00000012253
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Also known as
    TMEM136
    Orthologs
    human mouse all
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    Genomic context

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    See TLCD5 in Genome Data Viewer
    Location:
    chromosome: 14
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 14 NC_041767.1 (113395395..113403521)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 14 NC_027906.1 (113183669..113193843)

    Chromosome 14 - NC_041767.1Genomic Context describing neighboring genes Neighboring gene out at first homolog Neighboring gene POU class 2 homeobox 3 Neighboring gene Rho guanine nucleotide exchange factor 12 Neighboring gene glutamate ionotropic receptor kainate type subunit 4 Neighboring gene elongin-C pseudogene

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequencing and comparison of two nonhuman primate animal models, the cynomolgus and Chinese rhesus macaques. Yan G, et al. Nat Biotechnol, 2011 Oct 16. PMID 22002653
    2. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    transmembrane protein 136

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041767.1 Reference Mmul_10 Primary Assembly

      Range
      113395395..113403521
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001106879.4 → XP_001106879.1  transmembrane protein 136 isoform X2

      See identical proteins and their annotated locations for XP_001106879.1

      UniProtKB/TrEMBL
      A0A1D5QJX3
      Related
      ENSMMUP00000048346.2, ENSMMUT00000054919.2
      Conserved Domains (1) summary
      smart00724
      Location:29 → 222
      TLC; TRAM, LAG1 and CLN8 homology domains

    2. XM_015115965.2 → XP_014971451.1  transmembrane protein 136 isoform X3

      UniProtKB/TrEMBL
      F6V071
      Related
      ENSMMUP00000016074.4, ENSMMUT00000017163.4
      Conserved Domains (1) summary
      cl02759
      Location:1 → 121
      TRAM_LAG1_CLN8; TLC domain

    3. XM_028834082.1 → XP_028689915.1  transmembrane protein 136 isoform X2

      UniProtKB/TrEMBL
      A0A1D5QJX3
      Conserved Domains (1) summary
      smart00724
      Location:29 → 222
      TLC; TRAM, LAG1 and CLN8 homology domains

    4. XM_028834081.1 → XP_028689914.1  transmembrane protein 136 isoform X1

      UniProtKB/TrEMBL
      G7NCL5
      Conserved Domains (1) summary
      smart00724
      Location:51 → 244
      TLC; TRAM, LAG1 and CLN8 homology domains
    Nucleotide Protein
    Heading Accession and Version

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