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    LOC719351 pre-mRNA-processing factor 6 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 719351, updated on 9-Nov-2023

    Summary

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    Gene symbol
    LOC719351
    Gene description
    pre-mRNA-processing factor 6
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Also known as
    PRPF6
    Annotation information
    Annotation category: partial on reference assembly
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    Genomic context

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    See LOC719351 in Genome Data Viewer
    Location:
    chromosome: 10
    Exon count:
    14
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 10 NC_041763.1 (99226622..99260375)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 10 NC_027902.1 (253288..307279, complement)

    Chromosome 10 - NC_041763.1Genomic Context describing neighboring genes Neighboring gene zinc finger protein 512B Neighboring gene pre-mRNA-processing factor 6-like Neighboring gene sterile alpha motif domain containing 10 Neighboring gene chromosome 10 C20orf204 homolog Neighboring gene SRY-box transcription factor 18

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in mRNA splicing, via spliceosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in spliceosomal tri-snRNP complex assembly IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of U4/U6 x U5 tri-snRNP complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of catalytic step 2 spliceosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    pre-mRNA-processing factor 6
    Names
    PRP6 pre-mRNA processing factor 6 homolog

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041763.1 Reference Mmul_10 Primary Assembly

      Range
      99226622..99260375
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028828559.1 → XP_028684392.1  pre-mRNA-processing factor 6

      Conserved Domains (3) summary
      PRK11788
      Location:61 → 203
      PRK11788; tetratricopeptide repeat protein; Provisional
      TIGR02917
      Location:265 → 522
      PEP_TPR_lipo; putative PEP-CTERM system TPR-repeat lipoprotein
      sd00006
      Location:417 → 447
      TPR; TPR repeat [structural motif]
    Nucleotide Protein
    Heading Accession and Version

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