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    GNPDA1 glucosamine-6-phosphate deaminase 1 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 703036, updated on 17-Aug-2024

    Summary

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    Official Symbol
    GNPDA1provided by VGNC
    Official Full Name
    glucosamine-6-phosphate deaminase 1provided by VGNC
    Primary source
    VGNC:VGNC:73101
    Locus tag
    EGK_16966
    See related
    Ensembl:ENSMMUG00000009770
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See GNPDA1 in Genome Data Viewer
    Location:
    chromosome: 6
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 6 NC_041759.1 (139384187..139407197, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 6 NC_027898.1 (139780159..139802627, complement)

    Chromosome 6 - NC_041759.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC106998974 Neighboring gene protocadherin 12 Neighboring gene ring finger protein 14 Neighboring gene Nedd4 family interacting protein 1 Neighboring gene sprouty RTK signaling antagonist 4

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequencing and comparison of two nonhuman primate animal models, the cynomolgus and Chinese rhesus macaques. Yan G, et al. Nat Biotechnol, 2011 Oct 16. PMID 22002653
    2. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables glucosamine-6-phosphate deaminase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables identical protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in N-acetylglucosamine catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in N-acetylneuraminate catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in carbohydrate metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in glucosamine catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    glucosamine-6-phosphate isomerase 1
    NP_001244873.1
    XP_014996327.1
    XP_014996328.1
    XP_014996329.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001257944.2 → NP_001244873.1  glucosamine-6-phosphate isomerase 1

      See identical proteins and their annotated locations for NP_001244873.1

      Status: PROVISIONAL

      Source sequence(s)
      JU332368
      UniProtKB/TrEMBL
      A0A1D5Q4A2, A0A5F7ZWG8, A0A8J8Y1N7, G7MVC5
      Related
      ENSMMUP00000068985.1, ENSMMUT00000094551.1
      Conserved Domains (1) summary
      cl00339
      Location:1 → 253
      SugarP_isomerase; Sugar Phosphate Isomerase family; includes type A ribose 5-phosphate isomerase (RPI_A), glucosamine-6-phosphate (GlcN6P) deaminase, and 6-phosphogluconolactonase (6PGL). RPI catalyzes the reversible conversion of ribose-5-phosphate to ribulose ...

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041759.1 Reference Mmul_10 Primary Assembly

      Range
      139384187..139407197 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015140841.2 → XP_014996327.1  glucosamine-6-phosphate isomerase 1 isoform X1

      UniProtKB/TrEMBL
      A0A1D5Q4A2, A0A1D5R8R9
      Related
      ENSMMUP00000056709.1, ENSMMUT00000066197.2
      Conserved Domains (1) summary
      cl00339
      Location:1 → 253
      SugarP_isomerase; Sugar Phosphate Isomerase family; includes type A ribose 5-phosphate isomerase (RPI_A), glucosamine-6-phosphate (GlcN6P) deaminase, and 6-phosphogluconolactonase (6PGL). RPI catalyzes the reversible conversion of ribose-5-phosphate to ribulose ...

    2. XM_015140842.2 → XP_014996328.1  glucosamine-6-phosphate isomerase 1 isoform X1

      UniProtKB/TrEMBL
      A0A1D5Q4A2, A0A1D5R8R9
      Conserved Domains (1) summary
      cl00339
      Location:1 → 253
      SugarP_isomerase; Sugar Phosphate Isomerase family; includes type A ribose 5-phosphate isomerase (RPI_A), glucosamine-6-phosphate (GlcN6P) deaminase, and 6-phosphogluconolactonase (6PGL). RPI catalyzes the reversible conversion of ribose-5-phosphate to ribulose ...

    3. XM_015140843.2 → XP_014996329.1  glucosamine-6-phosphate isomerase 1 isoform X2

      UniProtKB/TrEMBL
      A0A1D5Q4A2, A0A5F7ZWG8, A0A8J8Y1N7, G7MVC5
      Conserved Domains (1) summary
      cl00339
      Location:1 → 253
      SugarP_isomerase; Sugar Phosphate Isomerase family; includes type A ribose 5-phosphate isomerase (RPI_A), glucosamine-6-phosphate (GlcN6P) deaminase, and 6-phosphogluconolactonase (6PGL). RPI catalyzes the reversible conversion of ribose-5-phosphate to ribulose ...
    Nucleotide Protein
    Heading Accession and Version

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