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    PCDH10 protocadherin 10 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 695100, updated on 17-Aug-2024

    Summary

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    Official Symbol
    PCDH10provided by VGNC
    Official Full Name
    protocadherin 10provided by VGNC
    Primary source
    VGNC:VGNC:75594
    See related
    Ensembl:ENSMMUG00000023149
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See PCDH10 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 5 NC_041758.1 (130896979..130956446)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 5 NC_027897.1 (132723057..132782555)

    Chromosome 5 - NC_041758.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC114678398 Neighboring gene uncharacterized LOC106998500 Neighboring gene 40S ribosomal protein S25 Neighboring gene uncharacterized LOC114678181

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables calcium ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in homophilic cell adhesion via plasma membrane adhesion molecules IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    protocadherin-10

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041758.1 Reference Mmul_10 Primary Assembly

      Range
      130896979..130956446
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_002804195.3 → XP_002804241.2  protocadherin-10 isoform X2

      UniProtKB/TrEMBL
      F7FHP2, I2CY84
      Related
      ENSMMUP00000030475.4, ENSMMUT00000032567.4
      Conserved Domains (3) summary
      cd11304
      Location:254 → 354
      Cadherin_repeat; Cadherin tandem repeat domain
      pfam08266
      Location:19 → 101
      Cadherin_2; Cadherin-like
      pfam16492
      Location:713 → 838
      Cadherin_C_2; Cadherin cytoplasmic C-terminal

    2. XM_015139211.2 → XP_014994697.1  protocadherin-10 isoform X1

      UniProtKB/TrEMBL
      I2CY84
      Related
      ENSMMUP00000034791.3, ENSMMUT00000041776.3
      Conserved Domains (3) summary
      cd11304
      Location:254 → 354
      Cadherin_repeat; Cadherin tandem repeat domain
      pfam08266
      Location:19 → 101
      Cadherin_2; Cadherin-like
      pfam16492
      Location:713 → 838
      Cadherin_C_2; Cadherin cytoplasmic C-terminal
    Nucleotide Protein
    Heading Accession and Version

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