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    TBC1D16 TBC1 domain family member 16 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 711901, updated on 17-Aug-2024

    Summary

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    Official Symbol
    TBC1D16provided by VGNC
    Official Full Name
    TBC1 domain family member 16provided by VGNC
    Primary source
    VGNC:VGNC:78228
    Locus tag
    EGK_09061
    See related
    Ensembl:ENSMMUG00000020840
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See TBC1D16 in Genome Data Viewer
    Location:
    chromosome: 16
    Exon count:
    17
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 16 NC_041769.1 (76261059..76363691, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 16 NC_027908.1 (73789065..73890101, complement)

    Chromosome 16 - NC_041769.1Genomic Context describing neighboring genes Neighboring gene chromobox 8 Neighboring gene chromobox 4 Neighboring gene uncharacterized LOC114673200 Neighboring gene coiled-coil domain 40 molecular ruler complex subunit Neighboring gene alpha glucosidase

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequencing and comparison of two nonhuman primate animal models, the cynomolgus and Chinese rhesus macaques. Yan G, et al. Nat Biotechnol, 2011 Oct 16. PMID 22002653
    2. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables GTPase activator activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in activation of GTPase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in early endosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    TBC1 domain family member 16

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001266638.1 → NP_001253567.1  TBC1 domain family member 16

      See identical proteins and their annotated locations for NP_001253567.1

      Status: PROVISIONAL

      Source sequence(s)
      JV046172
      UniProtKB/TrEMBL
      A0A5F7ZSZ3, A0A8J8XM79, G7NH70, I0FP67
      Related
      ENSMMUP00000027431.3, ENSMMUT00000029318.3
      Conserved Domains (1) summary
      smart00164
      Location:424 → 652
      TBC; Domain in Tre-2, BUB2p, and Cdc16p. Probable Rab-GAPs

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041769.1 Reference Mmul_10 Primary Assembly

      Range
      76261059..76363691 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015120372.2 → XP_014975858.1  TBC1 domain family member 16 isoform X3

      UniProtKB/TrEMBL
      A0A5F7ZSZ3, A0A8J8XM79, G7NH70, I0FP67
      Related
      ENSMMUP00000073446.1, ENSMMUT00000103684.1
      Conserved Domains (1) summary
      smart00164
      Location:424 → 652
      TBC; Domain in Tre-2, BUB2p, and Cdc16p. Probable Rab-GAPs

    2. XM_028835621.1 → XP_028691454.1  TBC1 domain family member 16 isoform X4

      UniProtKB/TrEMBL
      A0A5F7ZSZ3, A0A5F7ZVM4
      Related
      ENSMMUP00000069676.1, ENSMMUT00000089021.1
      Conserved Domains (1) summary
      smart00164
      Location:423 → 651
      TBC; Domain in Tre-2, BUB2p, and Cdc16p. Probable Rab-GAPs

    3. XM_028835620.1 → XP_028691453.1  TBC1 domain family member 16 isoform X3

      UniProtKB/TrEMBL
      A0A5F7ZSZ3, A0A8J8XM79, G7NH70, I0FP67
      Conserved Domains (1) summary
      smart00164
      Location:424 → 652
      TBC; Domain in Tre-2, BUB2p, and Cdc16p. Probable Rab-GAPs

    4. XM_015120370.2 → XP_014975856.2  TBC1 domain family member 16 isoform X2

      Conserved Domains (1) summary
      smart00164
      Location:423 → 643
      TBC; Domain in Tre-2, BUB2p, and Cdc16p. Probable Rab-GAPs

    5. XM_015120368.2 → XP_014975854.2  TBC1 domain family member 16 isoform X1

      Conserved Domains (1) summary
      smart00164
      Location:424 → 644
      TBC; Domain in Tre-2, BUB2p, and Cdc16p. Probable Rab-GAPs

    6. XM_015120369.2 → XP_014975855.2  TBC1 domain family member 16 isoform X1

      Conserved Domains (1) summary
      smart00164
      Location:424 → 644
      TBC; Domain in Tre-2, BUB2p, and Cdc16p. Probable Rab-GAPs

    7. XM_028835623.1 → XP_028691456.1  TBC1 domain family member 16 isoform X6

      Conserved Domains (1) summary
      smart00164
      Location:199 → 419
      TBC; Domain in Tre-2, BUB2p, and Cdc16p. Probable Rab-GAPs

    8. XM_028835625.1 → XP_028691458.1  TBC1 domain family member 16 isoform X7

      Conserved Domains (1) summary
      smart00164
      Location:183 → 403
      TBC; Domain in Tre-2, BUB2p, and Cdc16p. Probable Rab-GAPs

    9. XM_028835626.1 → XP_028691459.1  TBC1 domain family member 16 isoform X8

      Conserved Domains (1) summary
      smart00164
      Location:119 → 339
      TBC; Domain in Tre-2, BUB2p, and Cdc16p. Probable Rab-GAPs

    10. XM_028835622.1 → XP_028691455.1  TBC1 domain family member 16 isoform X5

      UniProtKB/TrEMBL
      F7HQM3
      Conserved Domains (1) summary
      smart00164
      Location:424 → 634
      TBC; Domain in Tre-2, BUB2p, and Cdc16p. Probable Rab-GAPs
    Nucleotide Protein
    Heading Accession and Version

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