U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    ANKS6 ankyrin repeat and sterile alpha motif domain containing 6 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 715178, updated on 17-Aug-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    ANKS6provided by VGNC
    Official Full Name
    ankyrin repeat and sterile alpha motif domain containing 6provided by VGNC
    Primary source
    VGNC:VGNC:103239
    See related
    Ensembl:ENSMMUG00000018523
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See ANKS6 in Genome Data Viewer
    Location:
    chromosome: 15
    Exon count:
    18
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 15 NC_041768.1 (44120848..44187627)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 15 NC_027907.1 (40854452..40919822)

    Chromosome 15 - NC_041768.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC114672755 Neighboring gene uncharacterized LOC114672754 Neighboring gene polypeptide N-acetylgalactosaminyltransferase 12 Neighboring gene gamma-aminobutyric acid type B receptor subunit 2 Neighboring gene septin-7-like Neighboring gene uncharacterized LOC114672756 Neighboring gene TBC1 domain family member 2

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in innate immune response IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    ankyrin repeat and SAM domain-containing protein 6

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041768.1 Reference Mmul_10 Primary Assembly

      Range
      44120848..44187627
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015117225.2 → XP_014972711.1  ankyrin repeat and SAM domain-containing protein 6 isoform X4

      UniProtKB/TrEMBL
      A0A5F8A4T0
      Conserved Domains (6) summary
      cd09518
      Location:773 → 837
      SAM_ANKS6; SAM domain of ANKS6 (or SamCystin) subfamily
      smart00454
      Location:776 → 835
      SAM; Sterile alpha motif
      cd00204
      Location:72 → 211
      ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
      pfam12796
      Location:115 → 219
      Ank_2; Ankyrin repeats (3 copies)
      pfam13637
      Location:225 → 277
      Ank_4; Ankyrin repeats (many copies)
      sd00045
      Location:78 → 108
      ANK; ANK repeat [structural motif]

    2. XM_028835030.1 → XP_028690863.1  ankyrin repeat and SAM domain-containing protein 6 isoform X3

      UniProtKB/TrEMBL
      A0A5F8A4T0
      Conserved Domains (4) summary
      cd09518
      Location:773 → 837
      SAM_ANKS6; SAM domain of ANKS6 (or SamCystin) subfamily
      PHA03095
      Location:94 → 405
      PHA03095; ankyrin-like protein; Provisional
      sd00045
      Location:78 → 108
      ANK; ANK repeat [structural motif]
      pfam13637
      Location:12 → 98
      Ank_4; Ankyrin repeats (many copies)

    3. XM_015117223.2 → XP_014972709.1  ankyrin repeat and SAM domain-containing protein 6 isoform X1

      UniProtKB/TrEMBL
      A0A5F8A4T0
      Conserved Domains (6) summary
      cd09518
      Location:773 → 837
      SAM_ANKS6; SAM domain of ANKS6 (or SamCystin) subfamily
      smart00454
      Location:776 → 835
      SAM; Sterile alpha motif
      cd00204
      Location:72 → 211
      ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
      pfam12796
      Location:115 → 219
      Ank_2; Ankyrin repeats (3 copies)
      pfam13637
      Location:225 → 277
      Ank_4; Ankyrin repeats (many copies)
      sd00045
      Location:78 → 108
      ANK; ANK repeat [structural motif]

    4. XM_001113098.4 → XP_001113098.1  ankyrin repeat and SAM domain-containing protein 6 isoform X5

      See identical proteins and their annotated locations for XP_001113098.1

      UniProtKB/TrEMBL
      A0A5F8A4T0
      Conserved Domains (6) summary
      cd09518
      Location:772 → 836
      SAM_ANKS6; SAM domain of ANKS6 (or SamCystin) subfamily
      smart00454
      Location:775 → 834
      SAM; Sterile alpha motif
      cd00204
      Location:72 → 211
      ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
      pfam12796
      Location:115 → 219
      Ank_2; Ankyrin repeats (3 copies)
      pfam13637
      Location:225 → 277
      Ank_4; Ankyrin repeats (many copies)
      sd00045
      Location:78 → 108
      ANK; ANK repeat [structural motif]

    5. XM_015117224.2 → XP_014972710.1  ankyrin repeat and SAM domain-containing protein 6 isoform X2

      UniProtKB/TrEMBL
      A0A5F8A4T0, F7A2F6
      Related
      ENSMMUP00000024370.4, ENSMMUT00000026043.4
      Conserved Domains (6) summary
      cd09518
      Location:772 → 836
      SAM_ANKS6; SAM domain of ANKS6 (or SamCystin) subfamily
      smart00454
      Location:775 → 834
      SAM; Sterile alpha motif
      cd00204
      Location:72 → 211
      ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
      pfam12796
      Location:115 → 219
      Ank_2; Ankyrin repeats (3 copies)
      pfam13637
      Location:225 → 277
      Ank_4; Ankyrin repeats (many copies)
      sd00045
      Location:78 → 108
      ANK; ANK repeat [structural motif]

    6. XM_028835032.1 → XP_028690865.1  ankyrin repeat and SAM domain-containing protein 6 isoform X6

      UniProtKB/TrEMBL
      A0A5F8A4T0
      Related
      ENSMMUP00000072948.1, ENSMMUT00000105236.1
      Conserved Domains (4) summary
      PHA03095
      Location:94 → 405
      PHA03095; ankyrin-like protein; Provisional
      sd00045
      Location:78 → 108
      ANK; ANK repeat [structural motif]
      pfam13637
      Location:12 → 98
      Ank_4; Ankyrin repeats (many copies)
      cl15755
      Location:773 → 801
      SAM_superfamily; SAM (Sterile alpha motif )

    RNA

    1. XR_003723198.1 RNA Sequence

    2. XR_003723197.1 RNA Sequence

    3. XR_001439964.2 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.