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    OTUD4 OTU deubiquitinase 4 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 701837, updated on 17-Aug-2024

    Summary

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    Official Symbol
    OTUD4provided by VGNC
    Official Full Name
    OTU deubiquitinase 4provided by VGNC
    Primary source
    VGNC:VGNC:75675
    See related
    Ensembl:ENSMMUG00000004437
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See OTUD4 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    23
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 5 NC_041758.1 (142766944..142815194, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 5 NC_027897.1 (144996784..145044875, complement)

    Chromosome 5 - NC_041758.1Genomic Context describing neighboring genes Neighboring gene 60S ribosomal protein L35 pseudogene Neighboring gene anaphase promoting complex subunit 10 Neighboring gene ATP binding cassette subfamily E member 1 Neighboring gene uncharacterized protein C11orf98 homolog pseudogene Neighboring gene 60S ribosomal protein L37 pseudogene

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables K63-linked deubiquitinase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables cysteine-type deubiquitinase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in negative regulation of interleukin-1-mediated signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in negative regulation of toll-like receptor signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in protein deubiquitination IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of protein K48-linked deubiquitination IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    OTU domain-containing protein 4
    Names
    OTU domain containing 4
    XP_001095019.4
    XP_001095354.3
    XP_014994779.2
    XP_014994780.2
    XP_014994781.2
    XP_014994782.2
    XP_028704617.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041758.1 Reference Mmul_10 Primary Assembly

      Range
      142766944..142815194 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015139295.2 → XP_014994781.2  OTU domain-containing protein 4 isoform X4

      UniProtKB/TrEMBL
      A0A5F8A3D6
      Conserved Domains (2) summary
      PHA03247
      Location:541 → 884
      PHA03247; large tegument protein UL36; Provisional
      cl19932
      Location:42 → 121
      OTU; OTU-like cysteine protease

    2. XM_001095354.4 → XP_001095354.3  OTU domain-containing protein 4 isoform X3

      UniProtKB/TrEMBL
      A0A1D5QKQ9, A0A5F8A3D6
      Related
      ENSMMUP00000048632.2, ENSMMUT00000069064.2
      Conserved Domains (2) summary
      PHA03247
      Location:542 → 885
      PHA03247; large tegument protein UL36; Provisional
      cl19932
      Location:42 → 121
      OTU; OTU-like cysteine protease

    3. XM_015139294.2 → XP_014994780.2  OTU domain-containing protein 4 isoform X2

      UniProtKB/TrEMBL
      A0A5F8A3D6
      Conserved Domains (2) summary
      PHA03247
      Location:548 → 891
      PHA03247; large tegument protein UL36; Provisional
      cl19932
      Location:42 → 128
      OTU; OTU-like cysteine protease

    4. XM_015139293.2 → XP_014994779.2  OTU domain-containing protein 4 isoform X1

      UniProtKB/TrEMBL
      A0A5F8A3D6
      Related
      ENSMMUP00000073680.1, ENSMMUT00000089721.1
      Conserved Domains (2) summary
      PHA03247
      Location:549 → 892
      PHA03247; large tegument protein UL36; Provisional
      cl19932
      Location:42 → 128
      OTU; OTU-like cysteine protease

    5. XM_001095019.4 → XP_001095019.4  OTU domain-containing protein 4 isoform X6

      UniProtKB/TrEMBL
      F7GN77, H9FW52
      Related
      ENSMMUP00000005919.4, ENSMMUT00000006292.4
      Conserved Domains (2) summary
      PHA03247
      Location:477 → 820
      PHA03247; large tegument protein UL36; Provisional
      cl19932
      Location:3 → 56
      OTU; OTU-like cysteine protease

    6. XM_015139296.2 → XP_014994782.2  OTU domain-containing protein 4 isoform X5

      UniProtKB/TrEMBL
      H9FW52
      Conserved Domains (2) summary
      PHA03247
      Location:484 → 827
      PHA03247; large tegument protein UL36; Provisional
      cl19932
      Location:3 → 63
      OTU; OTU-like cysteine protease

    7. XM_028848784.1 → XP_028704617.1  OTU domain-containing protein 4 isoform X7

      UniProtKB/TrEMBL
      H9FW52
      Related
      ENSMMUP00000080923.1, ENSMMUT00000092870.1
      Conserved Domains (1) summary
      PHA03247
      Location:431 → 774
      PHA03247; large tegument protein UL36; Provisional
    Nucleotide Protein
    Heading Accession and Version

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