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    HERPUD2 HERPUD family member 2 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 714414, updated on 17-Aug-2024

    Summary

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    Official Symbol
    HERPUD2provided by VGNC
    Official Full Name
    HERPUD family member 2provided by VGNC
    Primary source
    VGNC:VGNC:73216
    Locus tag
    EGK_13778
    See related
    Ensembl:ENSMMUG00000001350
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See HERPUD2 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 3 NC_041756.1 (79341862..79433038)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 3 NC_027895.1 (72994684..73051448)

    Chromosome 3 - NC_041756.1Genomic Context describing neighboring genes Neighboring gene septin 7 Neighboring gene gem-associated protein 7-like Neighboring gene glycine cleavage system H protein, mitochondrial-like Neighboring gene uncharacterized LOC114676936 Neighboring gene uncharacterized LOC106997459 Neighboring gene guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-5 pseudogene Neighboring gene uncharacterized LOC114676746

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in endoplasmic reticulum unfolded protein response IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 2 protein

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041756.1 Reference Mmul_10 Primary Assembly

      Range
      79341862..79433038
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028845866.1 → XP_028701699.1  homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 2 protein isoform X2

      UniProtKB/TrEMBL
      F7D6X4
      Related
      ENSMMUP00000001801.4, ENSMMUT00000001908.4
      Conserved Domains (1) summary
      cl28922
      Location:2 → 37
      Ubiquitin_like_fold; Beta-grasp ubiquitin-like fold

    2. XM_015133722.2 → XP_014989208.1  homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 2 protein isoform X1

      UniProtKB/TrEMBL
      A0A5F7ZQZ1, A0A8J8Y8X3, F7D6X4, G7MLH8
      Related
      ENSMMUP00000068057.1, ENSMMUT00000107756.1
      Conserved Domains (1) summary
      cd17119
      Location:9 → 85
      Ubl_HERP2; ubiquitin-like (Ubl) domain found in homocysteine-inducible endoplasmic reticulum stress protein HERP2 and similar proteins
    Nucleotide Protein
    Heading Accession and Version

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