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    ADAMTSL5 ADAMTS like 5 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 721290, updated on 17-Aug-2024

    Summary

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    Official Symbol
    ADAMTSL5provided by VGNC
    Official Full Name
    ADAMTS like 5provided by VGNC
    Primary source
    VGNC:VGNC:69540
    See related
    Ensembl:ENSMMUG00000003815
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See ADAMTSL5 in Genome Data Viewer
    Location:
    chromosome: 19
    Exon count:
    14
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 19 NC_041772.1 (1298960..1307499, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 19 NC_027911.1 (1307295..1312529, complement)

    Chromosome 19 - NC_041772.1Genomic Context describing neighboring genes Neighboring gene proprotein convertase subtilisin/kexin type 4 Neighboring gene receptor accessory protein 6 Neighboring gene polo like kinase 5 (inactive) Neighboring gene mex-3 RNA binding family member D

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables metalloendopeptidase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in extracellular matrix organization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in extracellular matrix IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    ADAMTS-like protein 5

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041772.1 Reference Mmul_10 Primary Assembly

      Range
      1298960..1307499 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028838644.1 → XP_028694477.1  ADAMTS-like protein 5 isoform X1

      UniProtKB/TrEMBL
      A0A1D5R3C0, G7NL55
      Conserved Domains (4) summary
      smart00209
      Location:48 → 97
      TSP1; Thrombospondin type 1 repeats
      cd03523
      Location:375 → 476
      NTR_like; NTR_like domain; a beta barrel with an oligosaccharide/oligonucleotide-binding fold found in netrins, complement proteins, tissue inhibitors of metalloproteases (TIMP), and procollagen C-proteinase enhancers (PCOLCE), amongst others. In netrins, the ...
      pfam05986
      Location:206 → 311
      ADAM_spacer1; ADAM-TS Spacer 1
      cl15456
      Location:106 → 174
      ADAM_CR; ADAM cysteine-rich

    2. XM_028838646.1 → XP_028694479.1  ADAMTS-like protein 5 isoform X3

      Conserved Domains (3) summary
      smart00209
      Location:48 → 97
      TSP1; Thrombospondin type 1 repeats
      pfam05986
      Location:206 → 311
      ADAM_spacer1; ADAM-TS Spacer 1
      cl15456
      Location:106 → 174
      ADAM_CR; ADAM cysteine-rich

    3. XM_028838643.1 → XP_028694476.1  ADAMTS-like protein 5 isoform X1

      UniProtKB/TrEMBL
      A0A1D5R3C0, G7NL55
      Related
      ENSMMUP00000054806.2, ENSMMUT00000064773.2
      Conserved Domains (4) summary
      smart00209
      Location:48 → 97
      TSP1; Thrombospondin type 1 repeats
      cd03523
      Location:375 → 476
      NTR_like; NTR_like domain; a beta barrel with an oligosaccharide/oligonucleotide-binding fold found in netrins, complement proteins, tissue inhibitors of metalloproteases (TIMP), and procollagen C-proteinase enhancers (PCOLCE), amongst others. In netrins, the ...
      pfam05986
      Location:206 → 311
      ADAM_spacer1; ADAM-TS Spacer 1
      cl15456
      Location:106 → 174
      ADAM_CR; ADAM cysteine-rich

    4. XM_028838645.1 → XP_028694478.1  ADAMTS-like protein 5 isoform X2

      UniProtKB/TrEMBL
      A0A5F8AH25, G7NL55
      Related
      ENSMMUP00000076252.1, ENSMMUT00000082939.1
      Conserved Domains (4) summary
      smart00209
      Location:38 → 87
      TSP1; Thrombospondin type 1 repeats
      cd03523
      Location:365 → 466
      NTR_like; NTR_like domain; a beta barrel with an oligosaccharide/oligonucleotide-binding fold found in netrins, complement proteins, tissue inhibitors of metalloproteases (TIMP), and procollagen C-proteinase enhancers (PCOLCE), amongst others. In netrins, the ...
      pfam05986
      Location:196 → 301
      ADAM_spacer1; ADAM-TS Spacer 1
      cl15456
      Location:96 → 164
      ADAM_CR; ADAM cysteine-rich
    Nucleotide Protein
    Heading Accession and Version

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