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    TET3 tet methylcytosine dioxygenase 3 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 707759, updated on 18-Sep-2024

    Summary

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    Official Symbol
    TET3provided by VGNC
    Official Full Name
    tet methylcytosine dioxygenase 3provided by VGNC
    Primary source
    VGNC:VGNC:106232
    See related
    Ensembl:ENSMMUG00000020551
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See TET3 in Genome Data Viewer
    Location:
    chromosome: 13
    Exon count:
    13
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 13 NC_041766.1 (34718928..34844470, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 13 NC_027905.1 (74989673..75115439)

    Chromosome 13 - NC_041766.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC106993013 Neighboring gene bolA family member 3 Neighboring gene uncharacterized LOC106993011 Neighboring gene deoxyguanosine kinase Neighboring gene actin gamma 2, smooth muscle Neighboring gene palmitoyltransferase ZDHHC6-like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables 5-methylcytosine dioxygenase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in oxidative demethylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in positive regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    methylcytosine dioxygenase TET3
    Names
    tet oncogene family member 3

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041766.1 Reference Mmul_10 Primary Assembly

      Range
      34718928..34844470 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028832371.1 → XP_028688204.1  methylcytosine dioxygenase TET3 isoform X1

      UniProtKB/TrEMBL
      A0A1D5QPN2, F7D294
      Related
      ENSMMUP00000027061.3, ENSMMUT00000028916.3
      Conserved Domains (3) summary
      PHA03247
      Location:383 → 752
      PHA03247; large tegument protein UL36; Provisional
      pfam02008
      Location:50 → 89
      zf-CXXC; CXXC zinc finger domain
      pfam12851
      Location:985 → 1112
      Tet_JBP; Oxygenase domain of the 2OGFeDO superfamily

    2. XM_015112665.2 → XP_014968151.2  methylcytosine dioxygenase TET3 isoform X2

      UniProtKB/TrEMBL
      G7NAD1
      Conserved Domains (2) summary
      PHA03247
      Location:290 → 659
      PHA03247; large tegument protein UL36; Provisional
      pfam12851
      Location:892 → 1019
      Tet_JBP; Oxygenase domain of the 2OGFeDO superfamily
    Nucleotide Protein
    Heading Accession and Version

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    Research Materials