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    TPCN2 two pore segment channel 2 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 709391, updated on 17-Aug-2024

    Summary

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    Official Symbol
    TPCN2provided by VGNC
    Official Full Name
    two pore segment channel 2provided by VGNC
    Primary source
    VGNC:VGNC:79288
    See related
    Ensembl:ENSMMUG00000010784
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See TPCN2 in Genome Data Viewer
    Location:
    chromosome: 14
    Exon count:
    27
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 14 NC_041767.1 (5714899..5752378, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 14 NC_027906.1 (5529961..5568934, complement)

    Chromosome 14 - NC_041767.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC114672215 Neighboring gene uncharacterized LOC114672216 Neighboring gene uncharacterized LOC114672217 Neighboring gene uncharacterized LOC114672218 Neighboring gene MAS related GPR family member F

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables monoatomic ion channel activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables voltage-gated channel activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in monoatomic ion transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in lysosomal membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    two pore calcium channel protein 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041767.1 Reference Mmul_10 Primary Assembly

      Range
      5714899..5752378 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028833096.1 → XP_028688929.1  two pore calcium channel protein 2 isoform X5

      UniProtKB/TrEMBL
      G7NBU4
      Conserved Domains (1) summary
      pfam00520
      Location:430 → 696
      Ion_trans; Ion transport protein

    2. XM_015113468.2 → XP_014968954.2  two pore calcium channel protein 2 isoform X6

      UniProtKB/TrEMBL
      G7NBU4
      Conserved Domains (1) summary
      pfam00520
      Location:431 → 668
      Ion_trans; Ion transport protein

    3. XM_001101571.4 → XP_001101571.2  two pore calcium channel protein 2 isoform X3

      UniProtKB/TrEMBL
      G7NBU4
      Conserved Domains (1) summary
      pfam00520
      Location:431 → 697
      Ion_trans; Ion transport protein

    4. XM_015113466.2 → XP_014968952.2  two pore calcium channel protein 2 isoform X2

      UniProtKB/TrEMBL
      G7NBU4
      Conserved Domains (1) summary
      pfam00520
      Location:430 → 696
      Ion_trans; Ion transport protein

    5. XM_028833097.1 → XP_028688930.1  two pore calcium channel protein 2 isoform X7

      Conserved Domains (1) summary
      pfam00520
      Location:184 → 315
      Ion_trans; Ion transport protein

    6. XM_015113469.2 → XP_014968955.2  two pore calcium channel protein 2 isoform X6

      UniProtKB/TrEMBL
      G7NBU4
      Conserved Domains (1) summary
      pfam00520
      Location:431 → 668
      Ion_trans; Ion transport protein

    7. XM_015113465.2 → XP_014968951.2  two pore calcium channel protein 2 isoform X1

      UniProtKB/TrEMBL
      A0A5F8A2T1, G7NBU4
      Related
      ENSMMUP00000071238.1, ENSMMUT00000099109.1
      Conserved Domains (1) summary
      pfam00520
      Location:431 → 697
      Ion_trans; Ion transport protein

    8. XM_028833095.1 → XP_028688928.1  two pore calcium channel protein 2 isoform X4

      UniProtKB/TrEMBL
      G7NBU4
      Conserved Domains (1) summary
      pfam00520
      Location:360 → 626
      Ion_trans; Ion transport protein

    9. XM_028833098.1 → XP_028688931.1  two pore calcium channel protein 2 isoform X8

      UniProtKB/TrEMBL
      F7BFE9, F7GUY6
      Related
      ENSMMUP00000037702.3, ENSMMUT00000044685.3
      Conserved Domains (1) summary
      pfam00520
      Location:184 → 315
      Ion_trans; Ion transport protein

    RNA

    1. XR_001439337.2 RNA Sequence

    2. XR_003722440.1 RNA Sequence

    3. XR_003722438.1 RNA Sequence

    4. XR_001439338.2 RNA Sequence

    5. XR_003722437.1 RNA Sequence

    6. XR_003722439.1 RNA Sequence

      Related
      ENSMMUT00000099563.1
    Nucleotide Protein
    Heading Accession and Version

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