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    GINS4 GINS complex subunit 4 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 703350, updated on 17-Aug-2024

    Summary

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    Official Symbol
    GINS4provided by VGNC
    Official Full Name
    GINS complex subunit 4provided by VGNC
    Primary source
    VGNC:VGNC:73021
    Locus tag
    EGK_18881
    See related
    Ensembl:ENSMMUG00000009123
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See GINS4 in Genome Data Viewer
    Location:
    chromosome: 8
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 8 NC_041761.1 (42117604..42133757)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 8 NC_027900.1 (43219193..43235523, complement)

    Chromosome 8 - NC_041761.1Genomic Context describing neighboring genes Neighboring gene golgin A7 Neighboring gene keratin, type I cytoskeletal 18 pseudogene Neighboring gene uncharacterized LOC114680235 Neighboring gene glycerol-3-phosphate acyltransferase 4 Neighboring gene NK6 homeobox 3

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequencing and comparison of two nonhuman primate animal models, the cynomolgus and Chinese rhesus macaques. Yan G, et al. Nat Biotechnol, 2011 Oct 16. PMID 22002653
    2. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in DNA-templated DNA replication IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in double-strand break repair via break-induced replication IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of GINS complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    DNA replication complex GINS protein SLD5

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001261222.2 → NP_001248151.1  DNA replication complex GINS protein SLD5

      See identical proteins and their annotated locations for NP_001248151.1

      Status: PROVISIONAL

      Source sequence(s)
      JV045736
      UniProtKB/TrEMBL
      A0A8J8YSV6, F7E9E1, G7MZ67
      Related
      ENSMMUP00000011968.2, ENSMMUT00000012763.4
      Conserved Domains (2) summary
      cd11711
      Location:26 → 146
      GINS_A_Sld5; Alpha-helical domain of GINS complex protein Sld5
      pfam16922
      Location:165 → 223
      SLD5_C; DNA replication complex GINS protein SLD5 C-terminus

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041761.1 Reference Mmul_10 Primary Assembly

      Range
      42117604..42133757
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015145234.2 → XP_015000720.1  DNA replication complex GINS protein SLD5 isoform X2

      Conserved Domains (2) summary
      cd11711
      Location:26 → 146
      GINS_A_Sld5; Alpha-helical domain of GINS complex protein Sld5
      pfam16922
      Location:165 → 193
      SLD5_C; DNA replication complex GINS protein SLD5 C-terminus

    2. XM_015145232.2 → XP_015000718.1  DNA replication complex GINS protein SLD5 isoform X1

      UniProtKB/TrEMBL
      A0A8J8YSV6, F7E9E1, G7MZ67
      Conserved Domains (2) summary
      cd11711
      Location:26 → 146
      GINS_A_Sld5; Alpha-helical domain of GINS complex protein Sld5
      pfam16922
      Location:165 → 223
      SLD5_C; DNA replication complex GINS protein SLD5 C-terminus

    3. XM_015145231.2 → XP_015000717.1  DNA replication complex GINS protein SLD5 isoform X1

      UniProtKB/TrEMBL
      A0A8J8YSV6, F7E9E1, G7MZ67
      Conserved Domains (2) summary
      cd11711
      Location:26 → 146
      GINS_A_Sld5; Alpha-helical domain of GINS complex protein Sld5
      pfam16922
      Location:165 → 223
      SLD5_C; DNA replication complex GINS protein SLD5 C-terminus

    4. XM_028852205.1 → XP_028708038.1  DNA replication complex GINS protein SLD5 isoform X1

      UniProtKB/TrEMBL
      A0A8J8YSV6, F7E9E1, G7MZ67
      Conserved Domains (2) summary
      cd11711
      Location:26 → 146
      GINS_A_Sld5; Alpha-helical domain of GINS complex protein Sld5
      pfam16922
      Location:165 → 223
      SLD5_C; DNA replication complex GINS protein SLD5 C-terminus

    5. XM_015145233.2 → XP_015000719.1  DNA replication complex GINS protein SLD5 isoform X1

      UniProtKB/TrEMBL
      A0A8J8YSV6, F7E9E1, G7MZ67
      Conserved Domains (2) summary
      cd11711
      Location:26 → 146
      GINS_A_Sld5; Alpha-helical domain of GINS complex protein Sld5
      pfam16922
      Location:165 → 223
      SLD5_C; DNA replication complex GINS protein SLD5 C-terminus
    Nucleotide Protein
    Heading Accession and Version

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