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    DSCAML1 DS cell adhesion molecule like 1 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 698212, updated on 17-Aug-2024

    Summary

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    Official Symbol
    DSCAML1provided by VGNC
    Official Full Name
    DS cell adhesion molecule like 1provided by VGNC
    Primary source
    VGNC:VGNC:97760
    See related
    Ensembl:ENSMMUG00000007794
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See DSCAML1 in Genome Data Viewer
    Location:
    chromosome: 14
    Exon count:
    33
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 14 NC_041767.1 (110492059..110857363, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 14 NC_027906.1 (110267085..110311778, complement)

    Chromosome 14 - NC_041767.1Genomic Context describing neighboring genes Neighboring gene ring finger protein 214 Neighboring gene uncharacterized LOC100429897 Neighboring gene beta-secretase 1 Neighboring gene centrosomal protein 164 Neighboring gene uncharacterized LOC114672415 Neighboring gene uncharacterized LOC114672414 Neighboring gene uncharacterized LOC106993495 Neighboring gene sodium/potassium-transporting ATPase subunit gamma

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables cell-cell adhesion mediator activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in axon guidance IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in dendrite self-avoidance IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in homophilic cell adhesion via plasma membrane adhesion molecules IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in axon IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    Down syndrome cell adhesion molecule-like protein 1
    Names
    Down syndrome cell adhesion molecule like 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041767.1 Reference Mmul_10 Primary Assembly

      Range
      110492059..110857363 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028834027.1 → XP_028689860.1  Down syndrome cell adhesion molecule-like protein 1

      UniProtKB/TrEMBL
      A0A1D5QAK9, H9FJH3
      Related
      ENSMMUP00000045077.1, ENSMMUT00000056920.2
      Conserved Domains (7) summary
      cd05734
      Location:767 → 845
      Ig_DSCAM; Immunoglobulin (Ig)-like domain of Down Syndrome Cell Adhesion molecule (DSCAM)
      smart00408
      Location:579 → 637
      IGc2; Immunoglobulin C-2 Type
      cd00063
      Location:1444 → 1534
      FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
      cd00096
      Location:1367 → 1437
      Ig; Immunoglobulin domain
      pfam07679
      Location:286 → 371
      I-set; Immunoglobulin I-set domain
      pfam13927
      Location:468 → 549
      Ig_3; Immunoglobulin domain
      cl11960
      Location:863 → 951
      Ig; Immunoglobulin domain
    Nucleotide Protein
    Heading Accession and Version

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