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    SVBP small vasohibin binding protein [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 698308, updated on 17-Aug-2024

    Summary

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    Official Symbol
    SVBPprovided by VGNC
    Official Full Name
    small vasohibin binding proteinprovided by VGNC
    Primary source
    VGNC:VGNC:106503
    Locus tag
    EGK_00646
    See related
    Ensembl:ENSMMUG00000059313
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Also known as
    CCDC23
    Orthologs
    human mouse all
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    Genomic context

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    See SVBP in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 1 NC_041754.1 (181738104..181751240)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 1 NC_027893.1 (42146551..42159259, complement)

    Chromosome 1 - NC_041754.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC106998104 Neighboring gene erythroblast membrane associated protein Neighboring gene uncharacterized LOC106998105 Neighboring gene transmembrane protein 269 Neighboring gene chromosome 1 C1orf50 homolog Neighboring gene prolyl 3-hydroxylase 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequencing and comparison of two nonhuman primate animal models, the cynomolgus and Chinese rhesus macaques. Yan G, et al. Nat Biotechnol, 2011 Oct 16. PMID 22002653
    2. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in negative regulation of protein ubiquitination IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in protein secretion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in apical part of cell IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    small vasohibin-binding protein
    Names
    coiled-coil domain containing 23
    coiled-coil domain-containing protein 23

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001266292.1 → NP_001253221.1  small vasohibin-binding protein

      See identical proteins and their annotated locations for NP_001253221.1

      Status: PROVISIONAL

      Source sequence(s)
      JV043579
      UniProtKB/TrEMBL
      A0A8J8YLG6, F7EAA3, G7MGD3
      Related
      ENSMMUP00000078201.1, ENSMMUT00000092740.1
      Conserved Domains (1) summary
      pfam15674
      Location:6 → 62
      CCDC23; Coiled-coil domain-containing protein 23

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041754.1 Reference Mmul_10 Primary Assembly

      Range
      181738104..181751240
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028831391.1 → XP_028687224.1  small vasohibin-binding protein isoform X1

      UniProtKB/TrEMBL
      A0A8J8YLG6, F7EAA3, G7MGD3
      Conserved Domains (1) summary
      pfam15674
      Location:6 → 62
      CCDC23; Coiled-coil domain-containing protein 23

    2. XM_015136265.2 → XP_014991751.1  small vasohibin-binding protein isoform X1

      UniProtKB/TrEMBL
      A0A8J8YLG6, F7EAA3, G7MGD3
      Conserved Domains (1) summary
      pfam15674
      Location:6 → 62
      CCDC23; Coiled-coil domain-containing protein 23
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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