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    CACNA1E calcium voltage-gated channel subunit alpha1 E [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 718092, updated on 17-Aug-2024

    Summary

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    Official Symbol
    CACNA1Eprovided by VGNC
    Official Full Name
    calcium voltage-gated channel subunit alpha1 Eprovided by VGNC
    Primary source
    VGNC:VGNC:70502
    See related
    Ensembl:ENSMMUG00000014498
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See CACNA1E in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    54
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 1 NC_041754.1 (38530835..39027241)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 1 NC_027893.1 (185600226..185925442, complement)

    Chromosome 1 - NC_041754.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC114679442 Neighboring gene uncharacterized LOC114679443 Neighboring gene uncharacterized LOC114679445 Neighboring gene uncharacterized LOC106994599 Neighboring gene zinc finger protein 648

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables calcium ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables high voltage-gated calcium channel activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in calcium ion import across plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in chemical synaptic transmission IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in neuronal cell body IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of voltage-gated calcium channel complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    voltage-dependent R-type calcium channel subunit alpha-1E

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041754.1 Reference Mmul_10 Primary Assembly

      Range
      38530835..39027241
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028851084.1 → XP_028706917.1  voltage-dependent R-type calcium channel subunit alpha-1E isoform X1

      UniProtKB/TrEMBL
      A0A1D5Q7C3
      Conserved Domains (4) summary
      PHA03307
      Location:2120 → 2359
      PHA03307; transcriptional regulator ICP4; Provisional
      pfam00520
      Location:1619 → 1876
      Ion_trans; Ion transport protein
      pfam08763
      Location:1949 → 2023
      Ca_chan_IQ; Voltage gated calcium channel IQ domain
      pfam16905
      Location:1877 → 1947
      GPHH; Voltage-dependent L-type calcium channel, IQ-associated

    2. XM_028851091.1 → XP_028706924.1  voltage-dependent R-type calcium channel subunit alpha-1E isoform X1

      UniProtKB/TrEMBL
      A0A1D5Q7C3
      Conserved Domains (4) summary
      PHA03307
      Location:2120 → 2359
      PHA03307; transcriptional regulator ICP4; Provisional
      pfam00520
      Location:1619 → 1876
      Ion_trans; Ion transport protein
      pfam08763
      Location:1949 → 2023
      Ca_chan_IQ; Voltage gated calcium channel IQ domain
      pfam16905
      Location:1877 → 1947
      GPHH; Voltage-dependent L-type calcium channel, IQ-associated

    3. XM_028851133.1 → XP_028706966.1  voltage-dependent R-type calcium channel subunit alpha-1E isoform X9

      Conserved Domains (2) summary
      pfam00520
      Location:1619 → 1876
      Ion_trans; Ion transport protein
      pfam16905
      Location:1877 → 1897
      GPHH; Voltage-dependent L-type calcium channel, IQ-associated

    4. XM_015122451.2 → XP_014977937.2  voltage-dependent R-type calcium channel subunit alpha-1E isoform X8

      UniProtKB/TrEMBL
      A0A1D5Q7C3
      Conserved Domains (4) summary
      PHA03307
      Location:2027 → 2297
      PHA03307; transcriptional regulator ICP4; Provisional
      pfam00520
      Location:1600 → 1857
      Ion_trans; Ion transport protein
      pfam08763
      Location:1930 → 2004
      Ca_chan_IQ; Voltage gated calcium channel IQ domain
      pfam16905
      Location:1858 → 1928
      GPHH; Voltage-dependent L-type calcium channel, IQ-associated

    5. XM_028851108.1 → XP_028706941.1  voltage-dependent R-type calcium channel subunit alpha-1E isoform X5

      UniProtKB/TrEMBL
      A0A1D5Q7C3
      Conserved Domains (4) summary
      PHA03307
      Location:2101 → 2340
      PHA03307; transcriptional regulator ICP4; Provisional
      pfam00520
      Location:1600 → 1857
      Ion_trans; Ion transport protein
      pfam08763
      Location:1930 → 2004
      Ca_chan_IQ; Voltage gated calcium channel IQ domain
      pfam16905
      Location:1858 → 1928
      GPHH; Voltage-dependent L-type calcium channel, IQ-associated

    6. XM_015122418.2 → XP_014977904.2  voltage-dependent R-type calcium channel subunit alpha-1E isoform X2

      UniProtKB/TrEMBL
      A0A1D5Q7C3
      Conserved Domains (4) summary
      PHA03307
      Location:2120 → 2359
      PHA03307; transcriptional regulator ICP4; Provisional
      pfam00520
      Location:1619 → 1876
      Ion_trans; Ion transport protein
      pfam08763
      Location:1949 → 2023
      Ca_chan_IQ; Voltage gated calcium channel IQ domain
      pfam16905
      Location:1877 → 1947
      GPHH; Voltage-dependent L-type calcium channel, IQ-associated

    7. XM_015122424.2 → XP_014977910.2  voltage-dependent R-type calcium channel subunit alpha-1E isoform X4

      UniProtKB/TrEMBL
      A0A1D5Q7C3
      Conserved Domains (4) summary
      PHA03307
      Location:2116 → 2355
      PHA03307; transcriptional regulator ICP4; Provisional
      pfam00520
      Location:1615 → 1872
      Ion_trans; Ion transport protein
      pfam08763
      Location:1945 → 2019
      Ca_chan_IQ; Voltage gated calcium channel IQ domain
      pfam16905
      Location:1873 → 1943
      GPHH; Voltage-dependent L-type calcium channel, IQ-associated

    8. XM_028851117.1 → XP_028706950.1  voltage-dependent R-type calcium channel subunit alpha-1E isoform X7

      UniProtKB/TrEMBL
      A0A1D5Q7C3, F7ETU5
      Related
      ENSMMUP00000004737.4, ENSMMUT00000005028.4
      Conserved Domains (4) summary
      PHA03307
      Location:2027 → 2297
      PHA03307; transcriptional regulator ICP4; Provisional
      pfam00520
      Location:1600 → 1857
      Ion_trans; Ion transport protein
      pfam08763
      Location:1930 → 2004
      Ca_chan_IQ; Voltage gated calcium channel IQ domain
      pfam16905
      Location:1858 → 1928
      GPHH; Voltage-dependent L-type calcium channel, IQ-associated

    9. XM_015122410.2 → XP_014977896.2  voltage-dependent R-type calcium channel subunit alpha-1E isoform X1

      UniProtKB/TrEMBL
      A0A1D5Q7C3
      Conserved Domains (4) summary
      PHA03307
      Location:2120 → 2359
      PHA03307; transcriptional regulator ICP4; Provisional
      pfam00520
      Location:1619 → 1876
      Ion_trans; Ion transport protein
      pfam08763
      Location:1949 → 2023
      Ca_chan_IQ; Voltage gated calcium channel IQ domain
      pfam16905
      Location:1877 → 1947
      GPHH; Voltage-dependent L-type calcium channel, IQ-associated

    10. XM_015122422.2 → XP_014977908.2  voltage-dependent R-type calcium channel subunit alpha-1E isoform X3

      UniProtKB/TrEMBL
      A0A1D5Q7C3
      Conserved Domains (4) summary
      PHA03307
      Location:2116 → 2355
      PHA03307; transcriptional regulator ICP4; Provisional
      pfam00520
      Location:1615 → 1872
      Ion_trans; Ion transport protein
      pfam08763
      Location:1945 → 2019
      Ca_chan_IQ; Voltage gated calcium channel IQ domain
      pfam16905
      Location:1873 → 1943
      GPHH; Voltage-dependent L-type calcium channel, IQ-associated

    11. XM_015122438.2 → XP_014977924.2  voltage-dependent R-type calcium channel subunit alpha-1E isoform X6

      UniProtKB/TrEMBL
      A0A1D5Q7C3, F7GGV6
      Related
      ENSMMUP00000019039.4, ENSMMUT00000020341.4
      Conserved Domains (4) summary
      PHA03307
      Location:2046 → 2316
      PHA03307; transcriptional regulator ICP4; Provisional
      pfam00520
      Location:1619 → 1876
      Ion_trans; Ion transport protein
      pfam08763
      Location:1949 → 2023
      Ca_chan_IQ; Voltage gated calcium channel IQ domain
      pfam16905
      Location:1877 → 1947
      GPHH; Voltage-dependent L-type calcium channel, IQ-associated

    12. XM_028851130.1 → XP_028706963.1  voltage-dependent R-type calcium channel subunit alpha-1E isoform X1

      UniProtKB/TrEMBL
      A0A1D5Q7C3
      Related
      ENSMMUP00000043939.1, ENSMMUT00000072978.2
      Conserved Domains (4) summary
      PHA03307
      Location:2120 → 2359
      PHA03307; transcriptional regulator ICP4; Provisional
      pfam00520
      Location:1619 → 1876
      Ion_trans; Ion transport protein
      pfam08763
      Location:1949 → 2023
      Ca_chan_IQ; Voltage gated calcium channel IQ domain
      pfam16905
      Location:1877 → 1947
      GPHH; Voltage-dependent L-type calcium channel, IQ-associated

    13. XM_028851088.1 → XP_028706921.1  voltage-dependent R-type calcium channel subunit alpha-1E isoform X1

      UniProtKB/TrEMBL
      A0A1D5Q7C3
      Conserved Domains (4) summary
      PHA03307
      Location:2120 → 2359
      PHA03307; transcriptional regulator ICP4; Provisional
      pfam00520
      Location:1619 → 1876
      Ion_trans; Ion transport protein
      pfam08763
      Location:1949 → 2023
      Ca_chan_IQ; Voltage gated calcium channel IQ domain
      pfam16905
      Location:1877 → 1947
      GPHH; Voltage-dependent L-type calcium channel, IQ-associated
    Nucleotide Protein
    Heading Accession and Version

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