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    FAM107A family with sequence similarity 107 member A [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 701455, updated on 17-Aug-2024

    Summary

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    Official Symbol
    FAM107Aprovided by VGNC
    Official Full Name
    family with sequence similarity 107 member Aprovided by VGNC
    Primary source
    VGNC:VGNC:72416
    Locus tag
    EGK_11527
    See related
    Ensembl:ENSMMUG00000064614
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See FAM107A in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 2 NC_041755.1 (114744864..114808544, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 2 NC_027894.1 (83481796..83545648)

    Chromosome 2 - NC_041755.1Genomic Context describing neighboring genes Neighboring gene potassium channel tetramerization domain containing 6 Neighboring gene acyl-CoA oxidase 2 Neighboring gene FAM3 metabolism regulating signaling molecule D Neighboring gene uncharacterized LOC114676369 Neighboring gene CFAP20 domain containing

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in actin filament bundle assembly IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in actin filament polymerization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of actin cytoskeleton organization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in neuron projection IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in stress fiber IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in synapse IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    actin-associated protein FAM107A
    Names
    downregulated in renal cell carcinoma
    protein FAM107A

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001257546.1 → NP_001244475.1  actin-associated protein FAM107A

      See identical proteins and their annotated locations for NP_001244475.1

      Status: PROVISIONAL

      Source sequence(s)
      JU321996
      UniProtKB/TrEMBL
      F7HJ98, G7MKZ4, I0FNW0
      Related
      ENSMMUP00000075378.1, ENSMMUT00000091261.1
      Conserved Domains (1) summary
      pfam06625
      Location:23 → 133
      DUF1151; Protein of unknown function (DUF1151)

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041755.1 Reference Mmul_10 Primary Assembly

      Range
      114744864..114808544 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015130522.2 → XP_014986008.1  actin-associated protein FAM107A isoform X2

      UniProtKB/TrEMBL
      A0A5F7Z911, A0A5K1VFK4, A0A8J8XSN9
      Related
      ENSMMUP00000061652.1, ENSMMUT00000086595.1
      Conserved Domains (1) summary
      pfam06625
      Location:54 → 164
      DUF1151; Protein of unknown function (DUF1151)

    2. XM_015130521.2 → XP_014986007.1  actin-associated protein FAM107A isoform X1

      Conserved Domains (1) summary
      pfam06625
      Location:51 → 161
      DUF1151; Protein of unknown function (DUF1151)

    3. XM_028843184.1 → XP_028699017.1  actin-associated protein FAM107A isoform X3

      UniProtKB/TrEMBL
      F7HJ98, G7MKZ4, I0FNW0
      Related
      ENSMMUP00000065424.1, ENSMMUT00000087233.1
      Conserved Domains (1) summary
      pfam06625
      Location:23 → 133
      DUF1151; Protein of unknown function (DUF1151)

    4. XM_015130523.2 → XP_014986009.1  actin-associated protein FAM107A isoform X3

      UniProtKB/TrEMBL
      F7HJ98, G7MKZ4, I0FNW0
      Related
      ENSMMUP00000075108.1, ENSMMUT00000095199.1
      Conserved Domains (1) summary
      pfam06625
      Location:23 → 133
      DUF1151; Protein of unknown function (DUF1151)
    Nucleotide Protein
    Heading Accession and Version

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