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    ZKSCAN8 zinc finger with KRAB and SCAN domains 8 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 706188, updated on 17-Aug-2024

    Summary

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    Official Symbol
    ZKSCAN8provided by VGNC
    Official Full Name
    zinc finger with KRAB and SCAN domains 8provided by VGNC
    Primary source
    VGNC:VGNC:78417
    Locus tag
    EGK_14613
    See related
    Ensembl:ENSMMUG00000003332
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Also known as
    LD5-1; ZNF192
    Orthologs
    human mouse all
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    Genomic context

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    See ZKSCAN8 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 4 NC_041757.1 (142119793..142138388, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 4 NC_027896.1 (28478908..28497742)

    Chromosome 4 - NC_041757.1Genomic Context describing neighboring genes Neighboring gene transfer RNA serine (anticodon GCU) Neighboring gene uncharacterized LOC706647 Neighboring gene uncharacterized LOC702796 Neighboring gene zinc finger and SCAN domain containing 16 Neighboring gene zinc finger protein 165

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in central nervous system development IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    zinc finger protein 192; zinc finger protein with KRAB and SCAN domains 8

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041757.1 Reference Mmul_10 Primary Assembly

      Range
      142119793..142138388 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015135783.2 → XP_014991269.1  zinc finger protein with KRAB and SCAN domains 8 isoform X1

      UniProtKB/TrEMBL
      A0A8J8XDW6, F7EH74, G7MRA3
      Conserved Domains (4) summary
      smart00431
      Location:47 → 159
      SCAN; leucine rich region
      COG5048
      Location:315 → 564
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:436 → 456
      ZF_C2H2; C2H2 Zn finger [structural motif]
      cl02581
      Location:221 → 264
      KRAB_A-box; KRAB (Kruppel-associated box) domain -A box

    2. XM_015135782.2 → XP_014991268.1  zinc finger protein with KRAB and SCAN domains 8 isoform X1

      UniProtKB/TrEMBL
      A0A8J8XDW6, F7EH74, G7MRA3
      Related
      ENSMMUP00000004440.2, ENSMMUT00000004708.4
      Conserved Domains (4) summary
      smart00431
      Location:47 → 159
      SCAN; leucine rich region
      COG5048
      Location:315 → 564
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:436 → 456
      ZF_C2H2; C2H2 Zn finger [structural motif]
      cl02581
      Location:221 → 264
      KRAB_A-box; KRAB (Kruppel-associated box) domain -A box

    3. XM_015135781.2 → XP_014991267.1  zinc finger protein with KRAB and SCAN domains 8 isoform X1

      UniProtKB/TrEMBL
      A0A8J8XDW6, F7EH74, G7MRA3
      Conserved Domains (4) summary
      smart00431
      Location:47 → 159
      SCAN; leucine rich region
      COG5048
      Location:315 → 564
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:436 → 456
      ZF_C2H2; C2H2 Zn finger [structural motif]
      cl02581
      Location:221 → 264
      KRAB_A-box; KRAB (Kruppel-associated box) domain -A box

    4. XM_028847761.1 → XP_028703594.1  zinc finger protein with KRAB and SCAN domains 8 isoform X2

      Conserved Domains (3) summary
      COG5048
      Location:128 → 377
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:249 → 269
      ZF_C2H2; C2H2 Zn finger [structural motif]
      cl02581
      Location:34 → 77
      KRAB_A-box; KRAB (Kruppel-associated box) domain -A box
    Nucleotide Protein
    Heading Accession and Version

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