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    YTHDF3 YTH N6-methyladenosine RNA binding protein F3 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 708171, updated on 17-Aug-2024

    Summary

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    Official Symbol
    YTHDF3provided by VGNC
    Official Full Name
    YTH N6-methyladenosine RNA binding protein F3provided by VGNC
    Primary source
    VGNC:VGNC:79614
    See related
    Ensembl:ENSMMUG00000006729
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See YTHDF3 in Genome Data Viewer
    Location:
    chromosome: 8
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 8 NC_041761.1 (63743527..63785980)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 8 NC_027900.1 (61163022..61205482)

    Chromosome 8 - NC_041761.1Genomic Context describing neighboring genes Neighboring gene TAR DNA-binding protein 43-like Neighboring gene uncharacterized LOC106999787 Neighboring gene interferon-induced transmembrane protein 3 pseudogene Neighboring gene uncharacterized LOC114680416

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables N6-methyladenosine-containing RNA reader activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables mRNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in mRNA destabilization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    YTH domain-containing family protein 3
    Names
    YTH N6-methyladenosine RNA binding protein 3
    YTH domain family protein 3
    YTH domain family protein 3-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041761.1 Reference Mmul_10 Primary Assembly

      Range
      63743527..63785980
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015145449.2 → XP_015000935.1  YTH domain-containing family protein 3 isoform X1

      UniProtKB/TrEMBL
      A0A1D5RKK7, G7MZG0
      Related
      ENSMMUP00000060851.2, ENSMMUT00000065956.2
      Conserved Domains (1) summary
      pfam04146
      Location:420 → 553
      YTH; YT521-B-like domain

    2. XM_015145452.2 → XP_015000938.1  YTH domain-containing family protein 3 isoform X2

      UniProtKB/TrEMBL
      F6TCC5, G7MZG0, H9FSE0
      Related
      ENSMMUP00000032089.2, ENSMMUT00000039010.3
      Conserved Domains (1) summary
      pfam04146
      Location:417 → 550
      YTH; YT521-B-like domain

    3. XM_015145450.2 → XP_015000936.1  YTH domain-containing family protein 3 isoform X1

      UniProtKB/TrEMBL
      A0A1D5RKK7, G7MZG0
      Related
      ENSMMUP00000066770.1, ENSMMUT00000083757.1
      Conserved Domains (1) summary
      pfam04146
      Location:420 → 553
      YTH; YT521-B-like domain

    4. XM_002808481.3 → XP_002808527.2  YTH domain-containing family protein 3 isoform X3

      UniProtKB/TrEMBL
      F7HFH7, G7MZG0
      Related
      ENSMMUP00000008849.4, ENSMMUT00000009416.4
      Conserved Domains (1) summary
      pfam04146
      Location:366 → 499
      YTH; YT521-B-like domain

    5. XM_028852698.1 → XP_028708531.1  YTH domain-containing family protein 3 isoform X3

      UniProtKB/TrEMBL
      F7HFH7, G7MZG0
      Conserved Domains (1) summary
      pfam04146
      Location:366 → 499
      YTH; YT521-B-like domain

    6. XM_028852697.1 → XP_028708530.1  YTH domain-containing family protein 3 isoform X1

      UniProtKB/TrEMBL
      A0A1D5RKK7, G7MZG0
      Related
      ENSMMUP00000069083.1, ENSMMUT00000101901.1
      Conserved Domains (1) summary
      pfam04146
      Location:420 → 553
      YTH; YT521-B-like domain
    Nucleotide Protein
    Heading Accession and Version

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